Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_1614 |
Symbol | |
ID | 4922779 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | + |
Start bp | 1846228 |
End bp | 1846434 |
Gene Length | 207 bp |
Protein Length | 68 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 640163176 |
Product | cold-shock DNA-binding domain-containing protein |
Protein accession | YP_001093740 |
Protein GI | 127512543 |
COG category | [K] Transcription |
COG ID | [COG1278] Cold shock proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.074349 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.00762568 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTCTCAAG TTACTGGCGT TGTTAAGTGG TTCAACTCTG ACAAAGGTTT TGGTTTTATC GAGCAAGAGT CTGGCCCAGA CGTTTTCGTA CACTTCCGTG CGATCAACTC TGACGGTTTC AAAACTCTAG ACGAAGGTCA GAAAGTGCAG TTCACTGTGA CTCAAGGTCA AAAAGGTCCA CAAGCTGAGA ACGTAACTGT TATCTAA
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Protein sequence | MSQVTGVVKW FNSDKGFGFI EQESGPDVFV HFRAINSDGF KTLDEGQKVQ FTVTQGQKGP QAENVTVI
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