| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1481 |
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| Symbol | |
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| ID | 4922446 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 1705968 |
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| End bp | 1706690 |
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| Gene Length | 723 bp |
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| Protein Length | 240 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640163036 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001093607 |
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| Protein GI | 127512410 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACTCA TGATAACCGG CGCCACCTCT GGGATAGGCA AGCAGCTGGC CCTTGGCTAT
GCCAAGGCCG GGCATAAAGT AATCGCCTGC GGTCGCAGTC AGACAAAGCT AGATGCTTTG
GCAGAGGCGC AGCCTAACAT CAGCACCTTG TGTTTCGATC TGATGCAGTA CGATAGCTAT
CCTGCGCTCG CTGCCGACCA TGGCCCGCTG GATCTGCTTA TTCTCAACGC CGGCGACTGC
GAATATATCG ACGATGCGCT CAACTTCGAT GCCAAGCGTT TCGACAAAAT TATCAACATC
AACCTTATCG CCATTGGCTA CGCCCTGCAG GCCTGGTTAC CCAATTTGAA GCCTGGCGGT
CGCCTGGTGT TGGTCAGTTC CAGCGCCCAG CTTTTGGCGC TGCCTCGAGC CGAGGCCTAC
GGCGCCTCCA AGGCGGGGCT GAGTTATCTG GCCAAGGTGC TGGCGATCGA TCTGGCTAAG
CATCAGATAG AGGTAACCTT GGTGCATCCA GGCTTCGTGC AGACGCCGCT AACGGATAGA
AACACCTTCG CCATGCCCAT GATGATCGGC GCCGAGGAGG CCGCCTTGAC CATAATGCGT
GGCATCGCCA AGGGCAAGCG CGACATTCGC TTCCCACGCC TGTTTATCTG GCTGATGCAG
AGCCTCTCAC TGTTACCTTT TTCGCTCTGG CGCCGTCTCG CCATGAGGAT GGTGTCTTCA
TGA
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| Protein sequence | MKLMITGATS GIGKQLALGY AKAGHKVIAC GRSQTKLDAL AEAQPNISTL CFDLMQYDSY
PALAADHGPL DLLILNAGDC EYIDDALNFD AKRFDKIINI NLIAIGYALQ AWLPNLKPGG
RLVLVSSSAQ LLALPRAEAY GASKAGLSYL AKVLAIDLAK HQIEVTLVHP GFVQTPLTDR
NTFAMPMMIG AEEAALTIMR GIAKGKRDIR FPRLFIWLMQ SLSLLPFSLW RRLAMRMVSS
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