| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1443 |
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| Symbol | |
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| ID | 4923150 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 1658689 |
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| End bp | 1660512 |
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| Gene Length | 1824 bp |
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| Protein Length | 607 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640162982 |
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| Product | integral membrane sensor signal transduction histidine kinase |
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| Protein accession | YP_001093569 |
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| Protein GI | 127512372 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTTATA TGTCGAAAAT TATAACAAGA AGAAAATACC TCGGCGTCGG CTTCATCATA
CTCCTGGGCC TCGCCTTTAC CCTACGGGTC GCCTACTGGT TCCATCTGGA ACATGGCTAT
GAGATGACGC GGCAACAATC CAACGCCCAG ATGAAGGAGC TACTGAGCTT CCTCTCAGGG
TCTCTAAGTC GCTATGAGAG CATCCCCCAT GTGCTCTCCA CCAACCCGCT GCTGGCCAGT
GCCCTGTTAA AGCAGGACGA TCCCGATACC ATCACGCCAC TCAACCGCTA TCTGGAGGAG
ATCCAGAGCA TCACAGAGGC GCTGGATATC TATCTGGTCA ATATCGACGG CGATGCCATC
GCCGCCAGCA ACTGGCAGCA GAGTTACTCC TTTATTGGCA AGAATTACGC CTTCAGACCC
TATTTCAAGG ATGCCATCGA GGGCAAGATG GGCCGCTATT TCGCCGTCGG CACCAGCTCG
AACAAACGCG GCTACTACTT CTCCTATCCC ATCTACAGCC ACGGCTACCC GGTCACCCCC
AGCCAGGGCG AGGCCAAGGT GTTAGGGGCG ATAGTGGTTA AGGTCGATGT TACCGAGATA
GAACAGCAGA GCACAGGCAT GGCCAGGGGC AGCAACTATG AGTTCGCCAT CAGCGACCCG
GACCATATTA TCTTCCTCTC CAGCCGGCCT GAGTGGCGCC TCACCGCGCT GACGCCTGTG
ACCCATCAGC TCAAGCAGCG CATCGAATCC TCGAGACGCT ACGCCAACCG TGAGATCAGT
CCGCTGGCGA TAGAGCCCCC CTTTGCCCCA TCCCTGGCAG CAGACTATCA GATCTATCAG
ATAGGCGATG ACAAGCGCGG CGCCGAGTTT ATGGATAACG CCGCCTACAT GAGCGACGCG
GGCTGGCAGG TGCATATCCT CTCGCCCATG ACGCCAATAT ACCGCTCGCT GCCGCCACTG
CTCCTGCTCT ATGGCGCCCT CTACCTGCTG TGCGCGCTGG CACTGTTATT CGCCATCGAG
AAGCGTAAGA ACACCCGCCG CATGCAACAG GCCCATGAGC AGTTAGAACA AAGAGTCAAG
GAGCGCACCC AGGCGCTGGA GACCAGCCAC CAACAGCTCA AAGAGGCCCA GGATGAGTTG
ATCCAGGCCG CTAAACTCAC AGTGATCGGC AGCCTGTCGG CCAGCATCAA CCATGAGATC
AATCAGCCGC TGGCGGCGAT TCGCAGCTAT GCACAGAACA CCCAGACCCT GCTCTCCCGC
GCCAAGTGGG ACGATGTCTC CAGCAACATA ATGACCATCA TAGAGCTCAC CGACCGCCTA
GCGGCGATAG TTTCGCAATT TAAGAGCTTT ACCCGTAAGA GCCAGGGCAA CGACAAGGCG
ATTAGCGTGG CGCAGTGCAT CAGGGATGCG CTGACCATAG TCCAGCCCGA GGTGGACAAG
CAGGGAATTG ATCTGGTGCT CAACAACACA GAGTGTCAGA CGCTGCTCTG GGGCGACCCA
ATTAGGCTAC AGCAGGTGCT GATCAACCTG ATGAGCAATG CCATGGTAGC CATGCGCGCC
AACAACCCGA AACAGCTGAT CATAGGTGTG GTGGTGAGCA ACCGACTGGA GATCACCATA
GAAGATACCG GCACTGGCAT AGACGAGAGC CAGATGCAGA AGATCTTCGA CCCCTACTAC
ACCAGCTCGC GTCAAGGACT GGGCTTGGGG CTTTCGATCT CCCGGCGTAT CGTCGAGGCG
ATGCAGGGTA AGATAAGCGT TGCCAACCGC CAACAGGGCG GCGCCATCTT CCAGATCACC
TTGCCCATTC ATGCAGTAGG ATAG
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| Protein sequence | MPYMSKIITR RKYLGVGFII LLGLAFTLRV AYWFHLEHGY EMTRQQSNAQ MKELLSFLSG
SLSRYESIPH VLSTNPLLAS ALLKQDDPDT ITPLNRYLEE IQSITEALDI YLVNIDGDAI
AASNWQQSYS FIGKNYAFRP YFKDAIEGKM GRYFAVGTSS NKRGYYFSYP IYSHGYPVTP
SQGEAKVLGA IVVKVDVTEI EQQSTGMARG SNYEFAISDP DHIIFLSSRP EWRLTALTPV
THQLKQRIES SRRYANREIS PLAIEPPFAP SLAADYQIYQ IGDDKRGAEF MDNAAYMSDA
GWQVHILSPM TPIYRSLPPL LLLYGALYLL CALALLFAIE KRKNTRRMQQ AHEQLEQRVK
ERTQALETSH QQLKEAQDEL IQAAKLTVIG SLSASINHEI NQPLAAIRSY AQNTQTLLSR
AKWDDVSSNI MTIIELTDRL AAIVSQFKSF TRKSQGNDKA ISVAQCIRDA LTIVQPEVDK
QGIDLVLNNT ECQTLLWGDP IRLQQVLINL MSNAMVAMRA NNPKQLIIGV VVSNRLEITI
EDTGTGIDES QMQKIFDPYY TSSRQGLGLG LSISRRIVEA MQGKISVANR QQGGAIFQIT
LPIHAVG
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