Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_1281 |
Symbol | |
ID | 4920470 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | - |
Start bp | 1481125 |
End bp | 1481868 |
Gene Length | 744 bp |
Protein Length | 247 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 640162822 |
Product | hypothetical protein |
Protein accession | YP_001093410 |
Protein GI | 127512213 |
COG category | [D] Cell cycle control, cell division, chromosome partitioning |
COG ID | [COG1192] ATPases involved in chromosome partitioning |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.400451 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCATTT TAGTTGGCGG TGAAAAAGGC GGTAGCGGAA AGAGCTGTTT AGCCCAAAAC ATAGCGGTAT TTCTCACGGT AGAATGCGGC GCGTCGGTCA TCATGGTCGA TTGTGATCCC CAGCGGACCA CCTCAGACTG GATTCAAGCT CGTAACAACA ATGGCACCCT GGCCAGCATC AACTGCGTAC AGCTCTACGG CAAGATACGC AACGATCTGC TCAGCCTGGA GCAACACTAT GACTATGTCA TCGTCGACTG TGGCGGTCAG GATAACCTGG CACTGCGCGC CACCATGTCG GTTGCCTCCC ATGTGTTGAT GCCACTGCGT CCTAAGCGCA GAGACTTGAA AACCGTCAGC CACATGGATG ATATCGTCGC TACCTGTATG ATGATTAACC CTAAGATGCG CGCATCTTTC GTGATCACTC AATGCCCTAG CCTACCAAAC CAGGCTAACC GCATCTTTGA GGCGAAAGAG GTGTGTAAGA CTTACGACAT CAACGTGCTT GACGCCATCA CCTACAGCCG AAACATTTAT GATGACAGCG AAGAATCGGG TCTGTCTGTC ATGGAAACTC AGCCAAAAGG CAAGGCCGCC GAGGAGATAC GCAGCATAGC CTGTGAAATG CTGCAAGCTT CGAGTGCTAC AGAAATTCGC AATCGTCTTG CCGAAAAACA GATGGATAAG TTAAGGGGTA ACTATGGGTC TGGCCGATCT CAAGAAAAGC TCTACGCAGT CTAG
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Protein sequence | MIILVGGEKG GSGKSCLAQN IAVFLTVECG ASVIMVDCDP QRTTSDWIQA RNNNGTLASI NCVQLYGKIR NDLLSLEQHY DYVIVDCGGQ DNLALRATMS VASHVLMPLR PKRRDLKTVS HMDDIVATCM MINPKMRASF VITQCPSLPN QANRIFEAKE VCKTYDINVL DAITYSRNIY DDSEESGLSV METQPKGKAA EEIRSIACEM LQASSATEIR NRLAEKQMDK LRGNYGSGRS QEKLYAV
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