| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1197 |
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| Symbol | |
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| ID | 4922453 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 1389101 |
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| End bp | 1390069 |
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| Gene Length | 969 bp |
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| Protein Length | 322 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640162731 |
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| Product | auxin efflux carrier |
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| Protein accession | YP_001093326 |
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| Protein GI | 127512129 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0679] Predicted permeases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.793167 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTAACCA CTCTCTCGCC ACTCTTTGTC GTGTTTGGCA TCATGGTCAC CGGCTTTGTC
GTGCAAAAGG CACGGCTACT GCCCGAGGGC AGCGACAACG TCCTTAATCA GTATGTCTAT
TACATCGCCT TTCCGGCGAT CATGATGATA GTGCTGGCAG AGACCCCAAT CGAAGAGATC
GCCAACTGGG GATTTATTGG CGGCTACAGC CTGGCCATGA CCCTCATCTA TCTGCTCACC
GGCCTGCTGT CACTCTGGTT ACAGCCCAAG GATAAACCCC TGGCGGCCAT TCGCGCCCTC
AACACCACCT TTGGTAACAC CTCCTTCATC GGCATTCCGC TGATGATGAT GCTGTTTCCC
GGGGATCAGC TAGCATTGGC CGCTGCCGCT TTAGCCAGCC TTTTATCGGT AACCGTATTT
GCCATAGTGC TGGCCCAGAT GGCGCTGTTT CAGGGACAGA CAGACAGCGC ACTCAAGACG
GTGTTTTTCG CCCTCATTCA AAACCCCATC ATACTGGGAA GCCTGGCCGG CGTAGCGATA
TCTGCCGCTC ATATAGAGCT GTACCGCCCC ATCGCCGAGA TCATCCGGCA ATTTGGCATG
ACTTCCAGCC CCTGCGCCCT GTTCGCCATC GGCATGGTGC TGTGCAAGGC CAACCAGGGA
GGCAGAAACG CCGCAGGCAT TCAGTCACGC CTTGCCGAGC TGGCCATGCT TAACCTGAGT
AAGCTACTGC TACAGCCCCT GCTGGCCTAT CTGCTCCTGG GCGCCTTAGG GGTTAGCGGA
CAACTGCTAC AGATGGGGGT AATTCTAGCA GCCCTGCCTA CCGCCGCCAG CGTCTACCTA
TTGGCCCACA GATTCAACGT AGGTGCCACC AGTAGCGCCC AGACCATCAG CCTGGGGATA
GTGATCAGCT TTGCCACCAT TCCGCTACTG CACCATTGGC TGGACTCGGG CACCGCAAGC
TTTTTATAA
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| Protein sequence | MLTTLSPLFV VFGIMVTGFV VQKARLLPEG SDNVLNQYVY YIAFPAIMMI VLAETPIEEI
ANWGFIGGYS LAMTLIYLLT GLLSLWLQPK DKPLAAIRAL NTTFGNTSFI GIPLMMMLFP
GDQLALAAAA LASLLSVTVF AIVLAQMALF QGQTDSALKT VFFALIQNPI ILGSLAGVAI
SAAHIELYRP IAEIIRQFGM TSSPCALFAI GMVLCKANQG GRNAAGIQSR LAELAMLNLS
KLLLQPLLAY LLLGALGVSG QLLQMGVILA ALPTAASVYL LAHRFNVGAT SSAQTISLGI
VISFATIPLL HHWLDSGTAS FL
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