| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1026 |
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| Symbol | |
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| ID | 4923559 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 1184359 |
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| End bp | 1185342 |
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| Gene Length | 984 bp |
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| Protein Length | 327 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640162559 |
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| Product | cobalamin biosynthesis protein CbiB |
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| Protein accession | YP_001093156 |
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| Protein GI | 127511959 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1270] Cobalamin biosynthesis protein CobD/CbiB |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.188551 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.854423 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACGATC TCATCCAACA GCTACTGCTC GACAGCCCCT TCTATCAGGG GGCTTCCATC
TTGTTGGTGG CCATCTTCAT GGCGCTGCTG GCGCCGCTGC CCAGGGAATA CCAGGCCTTC
TACTGGTTTT CTCAGCTGGC GCGCAGCCTG TCGGCCAAGG TGGCGAGAGC TGATCGCTCG
GCAAATCAGC AGCGAGTGGC GGGCAGCCTC TCTGTGCTGC TCCTGGTGCT GCCCTTCTGG
CTGATCCTGA GCTTCCTTTT GGAGCTGGCA GCCTTCCCCT GGTTCTTCGA GTGTCTGTTT
CTCTATCTCT GCCTGTGCGA TGAGCAGTTT CATAAGGTGG CAGAGGAGAC GGGCCAGGCG
CTTGCACGTC AAGACAAGCA GCGCGCCCGC CGCCTGCTGA GCCAGTGGGT CTATCGCGAC
ACCCGCGAGC TCTCCGAGGT GGGCATGAGC AAGACGGTGA TCGAGAAGTT GATGACCACC
TCCATCTATG GCACGGTCGC CACCATACTC TTCTTCGCCG TCGGCGGCGC TCCGCTGGTG
CTGGGCGCGC GGATGGTCAA GCAGCTGGAA TACACCTGGC CGGCGCTTAA TCCGCAATAC
CGCGAGTTTG GCCGCCCCGT CTATCTGCTG AGCTCCTTGC TCTACTGGCT GCCGACCCAG
GCCTGGAACT TCACCCTGGC TATTCAGGGC GGCCCCGGCG CCGTGGTGCA GCTGTTGAGG
CCCACCAAGA GCCCACTGCC GATAAACAAT CATCTGGCCA CCTGCGCCCT GGCGGCGAAA
GTGCTCAACA CTGAGCTCGG CGGCCCACAG AAGTTTGCCG GGCAGAGGGT CGATATCGCC
CGAATCGGCA CAGGCCCCAA GCCCACGCCC CATACCATAA CGGCGGCGCT TAGGCTGCTG
CGTCTGAGCA AGGGGATCTG GGTGCTCTCC GTGCTGCTCA TCCCCTGCCT TTGGGCCACA
TTGCGGCTGC TGGCGCACGC TTAA
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| Protein sequence | MHDLIQQLLL DSPFYQGASI LLVAIFMALL APLPREYQAF YWFSQLARSL SAKVARADRS
ANQQRVAGSL SVLLLVLPFW LILSFLLELA AFPWFFECLF LYLCLCDEQF HKVAEETGQA
LARQDKQRAR RLLSQWVYRD TRELSEVGMS KTVIEKLMTT SIYGTVATIL FFAVGGAPLV
LGARMVKQLE YTWPALNPQY REFGRPVYLL SSLLYWLPTQ AWNFTLAIQG GPGAVVQLLR
PTKSPLPINN HLATCALAAK VLNTELGGPQ KFAGQRVDIA RIGTGPKPTP HTITAALRLL
RLSKGIWVLS VLLIPCLWAT LRLLAHA
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