| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0960 |
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| Symbol | |
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| ID | 4923293 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 1103827 |
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| End bp | 1104777 |
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| Gene Length | 951 bp |
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| Protein Length | 316 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640162492 |
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| Product | hypothetical protein |
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| Protein accession | YP_001093090 |
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| Protein GI | 127511893 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2035] Predicted membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAATATC TGCTGACTTA TTTCAAAGGG ATGGCCATGG GGGCCGCCGA TGTGGTGCCC
GGCGTTTCCG GCGGTACCAT TGCCTTCATC ACGGGGATCC TCGACCCCCT GCTCAACAGC
ATACGTAAGG TTAATCCCAG CCTCATCGGC GTGATCCGCC AGCAGGGGCT GAAGGCCGCC
TTTATGCATA TTAACGGCCC CTTCCTGATC GCCGTGTTCG GCGGTATCCT CACCAGCATC
TTTACCCTGG CCAAGCTGAT CACCTATCTG CTGCATAGTC ATCCGATCCC CGTGTGGTCC
TTCTTCTTCG GTCTCATCAT CATCTCTGTG GTGCATATGC TCAAGCAGGT GAAGGGCTTC
TCTGTGGGAC GCCTGGCCCT GTTTGCCCTG GGCGTGGCAT TTGCCTGGGG GATCACAGTG
CTGCATCCAA TCGATATGCA GATGACCTAT CTGAATGTCT TCATCGGCGG CAGCATCGCT
ATCTGCGCCA TGTTGCTGCC GGGGATCTCT GGCAGTTTCA TCCTGCTGCT ACTCGGCCTC
TACACCTCGG TGCTGGGCGC CGCCAAGAGC CTGGATATTC CCGTGTTACT GACGTTCGCC
AGTGGCTGTG TGGCAGGCTT GCTCTCATTC AGTCATCTGC TGTCGGCGCT GCTGCGTAAA
TACCATGACG CCACGCTTAT ATTCCTCACC GGCTTGATGC TCGGCACTCT AGGTAAGATC
TGGCCCTGGA AGCAGGTGCT CACCTGGCGT GAAAACTCGG CGGGCGAGCA GGTGCCGCTG
CTGGAACAGA ACCTGTCGCC CATGAATTTT GAGCAACTGA CCGGGCAACC GGCGCAGCTT
GGCCTGGCCA TCTGCGCCAT GTTGGCGGGT ATCGCGCTGG TATGGGCACT GGAATATTTT
GCTGGCGACA ATGCTGCTAG CACTAAAAGT AAGAATACCG CTAAAAACTA G
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| Protein sequence | MKYLLTYFKG MAMGAADVVP GVSGGTIAFI TGILDPLLNS IRKVNPSLIG VIRQQGLKAA
FMHINGPFLI AVFGGILTSI FTLAKLITYL LHSHPIPVWS FFFGLIIISV VHMLKQVKGF
SVGRLALFAL GVAFAWGITV LHPIDMQMTY LNVFIGGSIA ICAMLLPGIS GSFILLLLGL
YTSVLGAAKS LDIPVLLTFA SGCVAGLLSF SHLLSALLRK YHDATLIFLT GLMLGTLGKI
WPWKQVLTWR ENSAGEQVPL LEQNLSPMNF EQLTGQPAQL GLAICAMLAG IALVWALEYF
AGDNAASTKS KNTAKN
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