| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0917 |
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| Symbol | |
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| ID | 4924275 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 1036479 |
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| End bp | 1037444 |
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| Gene Length | 966 bp |
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| Protein Length | 321 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 640162449 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001093047 |
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| Protein GI | 127511850 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0292456 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.707414 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAATC AAACACTTAA GAAAATCAGC GAACTCGATG TGTTTTGTTT GATGGTGTTT
AAAGTCATTT TTCAAACCGG ACATGCCAAC ATAGCGGCTA AGCAACTTAA TGTGTCAGCC
CCTAAAATTA GCCGCTGTTT GAATATGTTA CGTGCCACCT TCGACGACGA ACTCTTCTAT
CGTCGTCAGC TCGGACTCAA GCCGACGCCT ATGGCGGAGT TTCTCTACGA GCCCGTGTGT
CAGTTCTGTG AAGCCGTCCT GAAAATAGAA CAGTCTATCA GCGAAAAGAG CAGCGAGCTG
GCCAGTGAAC GCCTGAGAGT CGCGGTTACC CCGAGTATCA TGGCCAGCCT TTCCCTGGCT
TTTTCCCGCA GCAATGCCAG AGACGCCTTT AGTCAGTTAC AGTTTGTGAT CTGGGGAGAT
GACTCAGCCG ATCAGATCCA TAACGGTGAA CTGGATATGG GAGTGACGTT CGACGCCTGC
AACGAGCATC CGCTGTCGGT CGAGGCGTTA GGCTGTCTGA GCGGTGTCTG TCTGGCCGCC
AACGAGGAGC ATGCCATCTG GTCCCAGAGC GAGCCTTTGA CCCTGGAAAC CATCTGTCGT
CACCCCTTTC TCTGCCTGGA TGGCAAGGGC TTTAATGACA AGATCGACCC CCTTGAGGTG
TTCGCTCGTC AAAACGGTGC CGACATCGAC AGCATAGAAA GAGTCAGTTC GCGAGACGAG
TGGTACAGCC ATCTGCTGAC CATGAACTCT GTGGCTTTCC TGCCTTGCTC TGAGGCCGAG
ATCTGCGGCG CCCTGCCGGG GATCCGCGTG GTACGCCTGT CTGACGAGGA GGTGGGGCGC
CTTCACGGTG AAAGCATGTC GCCTCAATAC CTGTTGCTGG AGAATCCGGC CGAGTATCGA
CGCTATTCGC TGGAGCAGAG AGAATTAATT ATCCAGCTTA TCAAACAGCT ACTCGTTAAA
TGTTAA
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| Protein sequence | MSNQTLKKIS ELDVFCLMVF KVIFQTGHAN IAAKQLNVSA PKISRCLNML RATFDDELFY
RRQLGLKPTP MAEFLYEPVC QFCEAVLKIE QSISEKSSEL ASERLRVAVT PSIMASLSLA
FSRSNARDAF SQLQFVIWGD DSADQIHNGE LDMGVTFDAC NEHPLSVEAL GCLSGVCLAA
NEEHAIWSQS EPLTLETICR HPFLCLDGKG FNDKIDPLEV FARQNGADID SIERVSSRDE
WYSHLLTMNS VAFLPCSEAE ICGALPGIRV VRLSDEEVGR LHGESMSPQY LLLENPAEYR
RYSLEQRELI IQLIKQLLVK C
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