| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0904 |
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| Symbol | |
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| ID | 4920827 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 1026007 |
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| End bp | 1026573 |
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| Gene Length | 567 bp |
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| Protein Length | 188 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 640162436 |
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| Product | GPR1/FUN34/yaaH family protein |
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| Protein accession | YP_001093034 |
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| Protein GI | 127511837 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1584] Predicted membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGACAA AATTGGCCAA TCCAGCGCCT CTGGGTCTGA TGGGATTTGG TATGACGACC
GTGCTATTGA ACATACACAA CGCGGGCTTC TTTGCCATCG ATGCCATGAT CTTGGCGATG
GGGATCTTCT ACGGTGGTCT GGGCCAGGTG CTGGTGGGCA TGATGTGTTT TAAACGGGGA
GATACCTTCG GCACTACGGC ATTTACCTCC TATGGCCTGT TCTGGCTGAC CTTAGTGGGG
CTAATCATGC TGCCTAAGCT TGGCCTCGCC GCAGCCAGTC CGAGTCACTT CATGGGCTGG
TACTTAAGCC TCTGGGGCCT GTTTACCGCC TTCATGTTTG TCGGCTCATT GCGTTACCCA
CGCGCCAAGC AGGTGGTGTT CGGTTCCTTG ACGATACTCT TTTTCCTGCT TGCGGCCCGT
GACTTCACAG GTAGCGAGTT GATTGGGATG ATCGCCGGGT TCGAAGGGAT CTTCTGCGGC
GCCAGCGCCA TCTACTTCGC CATGGCTCAG GTGCTTAATC AGGAGTATGG CCGGGTGATT
CTGCCCATTG GTGAGGTTAA GGCTTAG
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| Protein sequence | MSTKLANPAP LGLMGFGMTT VLLNIHNAGF FAIDAMILAM GIFYGGLGQV LVGMMCFKRG
DTFGTTAFTS YGLFWLTLVG LIMLPKLGLA AASPSHFMGW YLSLWGLFTA FMFVGSLRYP
RAKQVVFGSL TILFFLLAAR DFTGSELIGM IAGFEGIFCG ASAIYFAMAQ VLNQEYGRVI
LPIGEVKA
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