| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0892 |
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| Symbol | |
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| ID | 4923275 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 1013039 |
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| End bp | 1014508 |
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| Gene Length | 1470 bp |
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| Protein Length | 489 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640162424 |
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| Product | ATPase central domain-containing protein |
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| Protein accession | YP_001093022 |
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| Protein GI | 127511825 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0464] ATPases of the AAA+ class |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0191229 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.946519 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAGATA TCAGGGACCT CACCGCCGTC CTGCGCTCAA ACACCCCCAT AGTGGTGATC
GAAACCTATG AAGAGTACCG GGTGATCGAG CTGCTAAAGC GGGTGTCGAC CATCTTGTAT
CAGCCGCTGT TCACCTGGAG CATCACTCAA GGCCTTACCC GCGCCGATGT GAAGATGGGA
ACCCAGAAGT TCAACACAGA TCCCACGGAG ATCCTGGGGC AGATTAAGTC CACCAGTCAG
CAGGGGATCT ATGTGTTGTG TGACTTTCAT CCCTTCGTCG ACAACGCGCC AAAGAATGTG
CGTCTGCTCA AGGAGATCGC GCTGGAGTAT GAGGCGCTGA AACATACCAT AGTCCTGGTG
AGCCATGCCT TCGATATTCC ACCCGAGATT AAACGCTACT GCGCCCATTT CTCCATCTCG
CTGCCGGATA CGGCGCAGCT GCAAAATCTC ATCTATGAGC AGATAGACAG GGCCCGTGCC
GATGGTTTGC TGCAGAGCGT CGATGAAGAT GCGGTGCTCA AGTTGGCGGA GAACCTCAGG
GGGCTGACCT TCGACGATGC CCGTCGCCTG GCCCACAAGG CGATAGTGGA CGACGGAGCC
ATCACCCACT CGGATGTCGA CAGGATCAAC CAGGGCAAGT TTAAGCTGTT GGATATGGAA
GGCGTATTAC AGTTCGAATA TGACACCAGC GACTTCTCTC AGGTGGCCGG CCTGCATAAC
CTCAAGAAAT GGCTGTCCCA GCGTAGCCCT GCATCGAGTG CTGAGGGGCG GGTCGATCAT
CCCAAGGGGA TTCTGCTGCT GGGGGTACAG GGCAGCGGCA AGAGCCTGGC GGCCAAGGCG
GTGGCGGGCA TGTGGCAGCG GCCCCTGCTG CGTCTGGATA TGTCGGCGCT ATATAACAAG
TATATCGGCG AGACAGAGAA GAATCTGCGC AACGCCCTGG CGCTGGCCGA CCTCATGGCC
CCCTGTGTCT TGTGGATCGA CGAGATAGAG AAGGGGCTCA GTAGCGGCAG CAGCGACGAT
GGCACCTCTA AGCGGATACT CGGCGCGCTA CTCACCTGGA TGGCCGAGCG TAAATCTGAG
GTGTTTCTGG TGGCCACGGC CAACGATATC AGCGCCTTGC CACCCGAGCT GATGCGTAAG
GGCAGGATGG ATGAGATCTT CTTCGTGGAT CTGCCCGACG ACAGCGTGCG CCAGGCGATC
TTCCTGATAC ATCTGCAGCG GCGTCAGCTG GACCCGCTCA ACTTCGATCT GGCTAAGCTG
TCACAGGCCA GTCAGGGCTT CTCCGGCGCC GAGATAGAGC AGGCGATCAT CTCGGCCCGT
TACACGGCGC GGGCGCTGGA GCAGAACGTA TCACAGCAGC TGCTGTTGGG GGAGTTGATG
AAGACGCGGC CCCTGTCCGT GGTGATGCGG GAAAAGCTGG CTGCGCTGCG TGATTGGGCA
AAGGGGCGTA CGGTCAACGC CCATCAATAG
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| Protein sequence | MQDIRDLTAV LRSNTPIVVI ETYEEYRVIE LLKRVSTILY QPLFTWSITQ GLTRADVKMG
TQKFNTDPTE ILGQIKSTSQ QGIYVLCDFH PFVDNAPKNV RLLKEIALEY EALKHTIVLV
SHAFDIPPEI KRYCAHFSIS LPDTAQLQNL IYEQIDRARA DGLLQSVDED AVLKLAENLR
GLTFDDARRL AHKAIVDDGA ITHSDVDRIN QGKFKLLDME GVLQFEYDTS DFSQVAGLHN
LKKWLSQRSP ASSAEGRVDH PKGILLLGVQ GSGKSLAAKA VAGMWQRPLL RLDMSALYNK
YIGETEKNLR NALALADLMA PCVLWIDEIE KGLSSGSSDD GTSKRILGAL LTWMAERKSE
VFLVATANDI SALPPELMRK GRMDEIFFVD LPDDSVRQAI FLIHLQRRQL DPLNFDLAKL
SQASQGFSGA EIEQAIISAR YTARALEQNV SQQLLLGELM KTRPLSVVMR EKLAALRDWA
KGRTVNAHQ
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