Gene Shew_0889 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew_0889 
Symbol 
ID4923260 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella loihica PV-4 
KingdomBacteria 
Replicon accessionNC_009092 
Strand
Start bp1009773 
End bp1010162 
Gene Length390 bp 
Protein Length129 aa 
Translation table11 
GC content54% 
IMG OID640162421 
Producthypothetical protein 
Protein accessionYP_001093019 
Protein GI127511822 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.844163 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTTTCTGG ATTACTTTGC GTTAGGCGTC ATCATTTTTG TCGCCGTTTT CCTGTTTTAT 
GGGGTGATCG TCATCCACGA TATTCCCTAT GAGATAGCCA AGAAGCGTAA TCATCCCCAG
CAAGATGCCC TGCATGTTGC CGGTTGGGTG AGCCTGTTTA CCCTGCATGC CATCTGGCCC
TTTCTGTGGA TCTGGGCGAC CCTGTATCGC GAAGACAGGG GCTGGGGGTT CAACAAGGTG
GTCGAGCGCG AGCTGGCGCT GGAAGATGAG GTGAAACAGC TCAATCAGAC CATAGCCCAG
CTTGAGCAGC GACTCACAGC TATCGAAGGC GGACAAAAGG CCCTGCATGT GGTCGAGACG
CCGTCCAACG ATCAAGAGAA GGAGTCATAA
 
Protein sequence
MFLDYFALGV IIFVAVFLFY GVIVIHDIPY EIAKKRNHPQ QDALHVAGWV SLFTLHAIWP 
FLWIWATLYR EDRGWGFNKV VERELALEDE VKQLNQTIAQ LEQRLTAIEG GQKALHVVET
PSNDQEKES