Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_0743 |
Symbol | |
ID | 4920572 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | + |
Start bp | 844566 |
End bp | 845867 |
Gene Length | 1302 bp |
Protein Length | 433 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 640162276 |
Product | sodium:dicarboxylate symporter |
Protein accession | YP_001092874 |
Protein GI | 127511677 |
COG category | [C] Energy production and conversion |
COG ID | [COG1301] Na+/H+-dicarboxylate symporters |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGCGTC AACAAACCTC TTCTTGGCTG GGCCGAGCCT GGTCTGGCTG GATGTCTGTG CCCCTGTGGC TACAAATCCT TATTGGTATG CTGCTGGGTA TCTGCGCCGG CCTGGGCCTG GGCGAACAGG CGGTGCTGCT TAAGCCAATA GGTACGCTTT TTGTCAACAC CATCAAGATG TTGATTGTCC CCTTGGTGTT CTGTTCCCTG ATCGTGGGGG TAACTTCGAT GCAGGATACC GCCAAGATGG GCCGCATCGG TTTTAAATCT TTCGCCTTCT ATCTGGGCAC TACCTCAATC GCCATCACGC TCGGTTTGGC CGTGGGTCAT ATCATGCAAC CCGGCGCCGG ACTGGCGATG ACCTCGGCTG AGAGTCACAA CGCGGTGAAA GAGGTGCCTT CTATCATGGA GACACTGATC AACATAGTGC CAACCAATCC TATCGCGGCG CTAGCGAGCG GGCAGATCCT GCAGGTGATC GTGTTCGCGG TGGCTCTGGG TATTGCCCTG GTGTTGATTG GCGACCATGG TAAGCCGGCC ATCAAGGTGT TCGAGAGCCT GGCCGAGGCC ATGTATAAGC TGACCGACAT GGTGATGAAG CTGGCGCCAT ATGGTGTGTT TGGCCTGATG GCCTGGGTGG CCGGTGAATA TGGCATGGAT ATGTTGATGC CGCTGATCAA GGTGATTCTG GCGGTTTATA TAGGCTGCGC CCTGCATATC ATAGGTTTCT ACAGCCTGGT GCTGACCTTC GTGGCCAAGC TCAACCCCAT GCAGTTCTTC AAGGGGATCA GCAATGCACT GGCGGTGGCC TATACCACCT CAAGCAGCGC CGGCACCTTG CCTGCCAGCA TGAAGTGCGC CAGCGAATCC TTAGGGATCA ACAAGAAGAT CTCCAGCTTC GTGCTGCCCC TGGGTACCAC CATCAACATG GATGGCACCG CCCTGTATCA GGGAGTCACG GCGCTGTTTG TTGCCCAAGC CTTCGGGATC GACCTCACCT GGGTCGACTA TATCACCATC ATTCTCACCG CGACCCTGGC TTCAATTGGT ACCGCTGGGG TGCCGGGTGC GGGTCTGGTG ATGCTTACCC TAGTGCTGAC CACGGTTGGC CTGCCGCTGG AAGGGGTGGC GATCATCGCG GGTATCGATC GTATCTTGGA TATGGCGCGT ACCGTAGTGA ACGTGTCCGG GGATCTGGTG GCGACCACAG TGATCGCCAA GTCTGAAGAT GAGCTGGATC TCGAGCACTA CAACGCCGAC GCCGAGCAGA GCCAGATACT GGCAGAGCGC CTGGATAGCT AG
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Protein sequence | MMRQQTSSWL GRAWSGWMSV PLWLQILIGM LLGICAGLGL GEQAVLLKPI GTLFVNTIKM LIVPLVFCSL IVGVTSMQDT AKMGRIGFKS FAFYLGTTSI AITLGLAVGH IMQPGAGLAM TSAESHNAVK EVPSIMETLI NIVPTNPIAA LASGQILQVI VFAVALGIAL VLIGDHGKPA IKVFESLAEA MYKLTDMVMK LAPYGVFGLM AWVAGEYGMD MLMPLIKVIL AVYIGCALHI IGFYSLVLTF VAKLNPMQFF KGISNALAVA YTTSSSAGTL PASMKCASES LGINKKISSF VLPLGTTINM DGTALYQGVT ALFVAQAFGI DLTWVDYITI ILTATLASIG TAGVPGAGLV MLTLVLTTVG LPLEGVAIIA GIDRILDMAR TVVNVSGDLV ATTVIAKSED ELDLEHYNAD AEQSQILAER LDS
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