| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0700 |
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| Symbol | |
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| ID | 4920775 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 794970 |
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| End bp | 795830 |
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| Gene Length | 861 bp |
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| Protein Length | 286 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640162233 |
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| Product | pirin domain-containing protein |
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| Protein accession | YP_001092831 |
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| Protein GI | 127511634 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1741] Pirin-related protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGTGA TCAGCCAATT TACCGCCCGC CCGGCTATGG ATGGCGACGG CGTCAACATC
CGCCGTGTGG CCGATTTTAT GAATACCCGC TTCGATCCCT TCCTGATGCT GGACGAGATC
AAGTCAGACG ACGCCAACGA CTATATTGGT GGCTTCCCGC CCCACCCTCA CCGCGGCATA
GAGACCTTTA CCTATATCCG TAAGGGCGGC TTCGAGCACA GGGATCAACT GGGGAACGTC
AAGGCGATCA AGGCAGGCGA TGTGCAGTGG ATGAGCACCG GCAGCGGCGT GGTGCACTCT
GAGATGCCCC TGGCCGACGC CCAGGATGGC CTGCACGGCT TCCAGATCTG GCTCAACATG
CCCACCAAGG AGAAGATGCG CCCGGCCATC TATCGCGACA GCACGGATGA GCCGCTGCCC
GAGACCGAAA ACGACAGTGG CGCCAAGCTG CGCGCCCTGG CCGGCAGCTG GCAGCTAACG
GGGGCCGCTC CCATCGATGC GCCGATTCAA ACCTTGGCAG GTGCAGGCAA GATTGCCGAT
CTCATGCTGG CGTCAAATGG CTCGGCCCAG CTGGACTTGC ATGAACGCGA ATATGTCGGC
CTCTACCTCT ATCAGGGAGA GATAGTCAGC CAGTCGGCGC CGCAGAAAAC CTATAGCGCG
GGGCAATATC TGATTGTCGA TAGCCAGCAG CTCATCACGC TTAAAGCGGG CGAACAAGGC
GCCGGTGCCC TGCTGTTTGC CGGTCAACCC ATTCGCGAGA AGATAGTGCA CATGGGTCCC
TTCGTGATGA ACACTGAACA GGAGATCCAG CAGGCGATCG CCGACTATCA GGCGGGGCGA
TTTGGCAGCA TCAAGGCCTA A
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| Protein sequence | MKVISQFTAR PAMDGDGVNI RRVADFMNTR FDPFLMLDEI KSDDANDYIG GFPPHPHRGI
ETFTYIRKGG FEHRDQLGNV KAIKAGDVQW MSTGSGVVHS EMPLADAQDG LHGFQIWLNM
PTKEKMRPAI YRDSTDEPLP ETENDSGAKL RALAGSWQLT GAAPIDAPIQ TLAGAGKIAD
LMLASNGSAQ LDLHEREYVG LYLYQGEIVS QSAPQKTYSA GQYLIVDSQQ LITLKAGEQG
AGALLFAGQP IREKIVHMGP FVMNTEQEIQ QAIADYQAGR FGSIKA
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