Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_0681 |
Symbol | |
ID | 4921312 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | + |
Start bp | 775175 |
End bp | 776254 |
Gene Length | 1080 bp |
Protein Length | 359 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 640162214 |
Product | penicillin V acylase-like protein |
Protein accession | YP_001092812 |
Protein GI | 127511615 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3049] Penicillin V acylase and related amidases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.219585 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAAAG TACTACTAAG CACCACTATC GCAGCCCTAT TTGCCACTAC TATGGGCGCC GCCATAAACG CCGAAGCCTG TTCTCGTCTG GTGACAGAGA CCCAATACGG TACTATGTTA ATGCGTACCG CAGACTGGGT GAGCACAGCC CCCTTCGACG GTCACATGTC TGTCTTCCCT GTCGGCACCG AGCGCACCAT GCGTGGTCAG GTTGCCGAGT ACCAGCAGGC CATGACTAAG TGGCAGACTA AGTACCACAC CCTCTCTATC GAAGAGCATG GCGCCTTTGG CGGCCTGTCG GGTCAGACTT CTAACGAGAA GGGACTCAGC GTGATGGCGC TATCTCAGCA TGACAGCGAG CCTTATCTGA GCCAGCACAA AGATAATGGC GCGCCAGCGG TCAACACCGC CGACGTGGTG AGCTTTATCA CCGAGCGTTA TGCCACCACC GCCGAGGTGA AAGCGGCCCT GGATAATGGT GAGTTCCAAA TCGCCTGGGC CTCTGCGCCA AATGGTATGG AGCACGCTGC GCCGCTGCAC TACTCTGTGG TCGATGCCGA CGGTAACATC ATGCTTATCC AACTGGTGAA GGGCGGTGAG CAGAAGATCT ATCTGGGTGA TGCCGAATCG GATCTGCGCG TCAAGACTAA CGACCCGCTG CAGGAGAAGC ACAGAGAGTA TATGCAGCAG TTCGACCTTA AGGATCCTAG CGTTGCCACT AAAATGCCTT GGAGCATCGG CGGCCTGGAG CGTAACTCTC GCCTGCTGGC CATGTCGACT CACATGGACT TAGAAGGGCT GAGCTACACA GAGACAGTTG CTCGTCAGAA GGGCACCTTC GATGCGGCGG CGCTGGTGCC ATTCGGTGTG CAGGACCCTA AGACGGGCGA AGACTACCCA AGCTTCTTCA GCATGCAGTA CAACCTGGAT AACGGTGATA TCTGGTTCCG CAGCCTGATG AGTGGCAAGG AGATCAAGTT TAACCTGGAA GACACCAAGC AGTTCAAGAC GCCAATGCAT GCCGATATCA TGGCTCAGGT GGATAAAGGC GCTCAGACCA TCACTTGGTC TAAGATGTAA
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Protein sequence | MKKVLLSTTI AALFATTMGA AINAEACSRL VTETQYGTML MRTADWVSTA PFDGHMSVFP VGTERTMRGQ VAEYQQAMTK WQTKYHTLSI EEHGAFGGLS GQTSNEKGLS VMALSQHDSE PYLSQHKDNG APAVNTADVV SFITERYATT AEVKAALDNG EFQIAWASAP NGMEHAAPLH YSVVDADGNI MLIQLVKGGE QKIYLGDAES DLRVKTNDPL QEKHREYMQQ FDLKDPSVAT KMPWSIGGLE RNSRLLAMST HMDLEGLSYT ETVARQKGTF DAAALVPFGV QDPKTGEDYP SFFSMQYNLD NGDIWFRSLM SGKEIKFNLE DTKQFKTPMH ADIMAQVDKG AQTITWSKM
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