| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0655 |
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| Symbol | |
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| ID | 4922609 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 742547 |
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| End bp | 743971 |
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| Gene Length | 1425 bp |
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| Protein Length | 474 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640162188 |
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| Product | peptidase M16 domain-containing protein |
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| Protein accession | YP_001092786 |
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| Protein GI | 127511589 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0612] Predicted Zn-dependent peptidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.126336 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCAAGCC CGACACGCCA TTCCCTGCTC GCCTGCCTGC TCAGCCTCAT AGGCGTGAGC
GCCATGGCCA GCGAGCCCAG CTTGGAGACG CTGGCCGCGC CCCTCTACCA GCTGGAGCAG
CAACTGAGCC GGCACGAACT GGATAACGGC ATGAGCCTAT ATCTGCTGGT GCTGCCCAAC
AAGCAGAGCG TCGCCCTCTC CAGCCAGTTT GCGGTGGGCT CGCGCAACGA ACTCGAGGGT
GAGTCGGGCT ACGCTCACCT GTTCGAGCAT ATGCTGTTCA AGGGCAGCGA AAATGCCCCG
GGCGACAGCT ATGGCCAGAC CATGAGCGCC AACAGCGGCT ATTTCAACGC CAGCACCTTC
TTCGATGCTA CCAACTACTA TGTCAACCTC CCCAGTCAGG CGTTAGAGCT GGCGCTCTGG
CTCGAATCCG ACCGCTTCAT CCGCCCCCAG CTCAGCGACG AAACGGTGCG TAATCAACAG
CAGACGGTAC TCGAGGAGAT GGCCACCACC ATAGACAATC AGCCCTACAT CCGCCCGGCC
ATGACCTTTC TGCTCAATCA GGTAAAGGGC AGCCCCTATG GCCATGCGGT GATCGGCTCT
GTTGACGATG TGTCGGCGGC CACGCCCGCC AGCCTGAATC GGTTTCACCA TGACTTCTAC
CGCCCCGATG CCATGCAACT GGCCATCGTC GGCGACTTGC CGTCACAAAC CTTTAGCTGG
GTGGAGCAGT ACTTCGGGAG CTGGCAGAAA CCCAAGCGTC CCCTGGCACA CTTCTCGCCG
CTAGCCGTCG AGCGCCAGCC GGTGCGAGGC GAGATAGTCG ATAGTCGCGG CCCCTGGCCT
GGTCTGATGT TGGCCTGGCA CACGGTGGGC GCCCTGCATC CGGATGCCGC CGCCATCACC
CTGGTCGAAG ATTATCTGCT GCAAAACCGC ACCAGTATGC TGGAGCAGAT GAACCTCAAG
GCGCCCGACA CCCTGCTGCA TTACTCAGTC CCCCTCTCCA TGGAGCATCT TGGCGTGATG
AACCTGATCC TGGTGCCCAG AGCCAAGGTC TCCCTCGACG ATCTCAGCCA GCGCATCACT
GGCATGGTGG ATACTCTGGC AAGCCAGGGG GTAACGCCGC TCGAGCTCGA TCAACTTAAA
CGCCGTTGGC TACTCACCCA GCTGAGCAAG CTGGACAATG ATGTCAGCCT GGCCAATCTG
CTCAGCGCCA GCCAACAAAG GGATAGAGAG CATCCCCTCA CCGCCCCCTG GGAGCGCATT
GCGGCGGTAA CTCAAGAGGA TATCAAACGG GTCACCCAGT ACTATCTGAG CCAAGGGTAT
GTTCGACTCG ACCTGTTGCC GCCCTGGTAT ATTCGTTGGG GCAAGGCGAT ATTAGAGTGG
CTGCCCGAAG GCCTTTCCGA TTCACTGGAG GAGAAGGTGC TATGA
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| Protein sequence | MPSPTRHSLL ACLLSLIGVS AMASEPSLET LAAPLYQLEQ QLSRHELDNG MSLYLLVLPN
KQSVALSSQF AVGSRNELEG ESGYAHLFEH MLFKGSENAP GDSYGQTMSA NSGYFNASTF
FDATNYYVNL PSQALELALW LESDRFIRPQ LSDETVRNQQ QTVLEEMATT IDNQPYIRPA
MTFLLNQVKG SPYGHAVIGS VDDVSAATPA SLNRFHHDFY RPDAMQLAIV GDLPSQTFSW
VEQYFGSWQK PKRPLAHFSP LAVERQPVRG EIVDSRGPWP GLMLAWHTVG ALHPDAAAIT
LVEDYLLQNR TSMLEQMNLK APDTLLHYSV PLSMEHLGVM NLILVPRAKV SLDDLSQRIT
GMVDTLASQG VTPLELDQLK RRWLLTQLSK LDNDVSLANL LSASQQRDRE HPLTAPWERI
AAVTQEDIKR VTQYYLSQGY VRLDLLPPWY IRWGKAILEW LPEGLSDSLE EKVL
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