| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0532 |
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| Symbol | |
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| ID | 4922120 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 602600 |
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| End bp | 603628 |
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| Gene Length | 1029 bp |
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| Protein Length | 342 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640162061 |
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| Product | peptidase M28 |
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| Protein accession | YP_001092663 |
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| Protein GI | 127511466 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2234] Predicted aminopeptidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAGAAGTC CCTACGCCCC TGTCCATAAG CACTACTTAA GGCTCGCACC ACTGCTAAGT
CTACTTAAGC TGGGCCTGTT CACCCTGAGC CTGCTCACAC TAGGCCTGGC AGGCTGCGCC
GAGAGCCCGA ACGATAGGCG CTGCGGCGAT GAGTATCGGC TCACCTGGAG CGATCAAGCA
CGGCTCCTCG CCCACGTAAA GACCCTCAGC AGCGATCAAT TCGCCGGACG TAAGACAGGC
ACAGATGGCG CCGCCCTGGC CAGAGATTAC ATAACCAATC AGATGCAGCT GGCGGGTCTC
ACCCCCTGGC AGGGCCATTT CGATCACGAC TTTGAGTACG ACTATCAGTT CGGCACTCGC
CTTGGCACCA ACATCATAGG CATATTGCCG GCAAACGAGC CCAGCGACAG TTGGCGTCTG
GTGGTCGCCC ACTATGATCA TCTGGGCAAG CAGGGCTATA AGCTCTATCA CGGCGCCGAC
GATAACGCCT CGGGTGTCGC CGGCATGCTT GAGATAGCCT TTCATAGCGC ACGCCTGCCA
AGAGATACCA ACCTGATGTT TATCGCCACC GACGCCGAAG AGCCGGGCCT CTATGGTTCC
AAGGCCTTTG TCGATGGCCT GATGGCGCCG GATGCCAAGC TCAAGGCCAG TCAAATCCAG
CTGATGGTCA ACCTGGACAT GATTGGCCGC CCCGCGCGCA ACAGCCGTAT TTACCTGGAG
GGCCGCCGTG GATTTGGCCA GTTCGAGCAG ATCAAGGCCC GGCTGGAGCA GACGGTCAAT
CTTTGTATTC GCGCCAATCA TCCCCCGGAA GCGGGCAAGA CGATACAGAA GGTCGATTGG
TTAAGAGCCT CAGATCATTA TCCTTTTCAT CAGGCGGGCA TCCCCTGGCT CTACTTCGGC
GTGCCGCCCC ACAAGGATTA CCACCAACCC AGTGACGCGG CGAGTAAGAT AGATGTTAAT
TTTCTGGCCG CTGTTACGGA AACCGCCTAT AAACTGTTAA TAATTGACAC TTATCTCTTG
AATAACTAA
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| Protein sequence | MRSPYAPVHK HYLRLAPLLS LLKLGLFTLS LLTLGLAGCA ESPNDRRCGD EYRLTWSDQA
RLLAHVKTLS SDQFAGRKTG TDGAALARDY ITNQMQLAGL TPWQGHFDHD FEYDYQFGTR
LGTNIIGILP ANEPSDSWRL VVAHYDHLGK QGYKLYHGAD DNASGVAGML EIAFHSARLP
RDTNLMFIAT DAEEPGLYGS KAFVDGLMAP DAKLKASQIQ LMVNLDMIGR PARNSRIYLE
GRRGFGQFEQ IKARLEQTVN LCIRANHPPE AGKTIQKVDW LRASDHYPFH QAGIPWLYFG
VPPHKDYHQP SDAASKIDVN FLAAVTETAY KLLIIDTYLL NN
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