| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0478 |
|---|
| Symbol | |
|---|
| ID | 4922589 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella loihica PV-4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009092 |
|---|
| Strand | + |
|---|
| Start bp | 535900 |
|---|
| End bp | 536136 |
|---|
| Gene Length | 237 bp |
|---|
| Protein Length | 78 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 640162007 |
|---|
| Product | XRE family transcriptional regulator |
|---|
| Protein accession | YP_001092609 |
|---|
| Protein GI | 127511412 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCTCCT CGTTAAACCA AGATTCGTTG GGATTACTGA TTAAAACCCG CAGGAAGGAA
GCGGCGCTGA CTCAAGAGGT GGCGGCAATG TTGTGCGGTG TCACTAAGAA AACCTTGATT
CGTGTCGAGA AGGGCGAAGA TGTCTACATC TCTACCGTAT TCAAGATACT TGATGGTCTG
GGGATTCGGC TCGCTGTCGA GTCAAAGTCA GATGCCGGCT CAAGTGAGTG GTACTAG
|
|---|
| Protein sequence | MSSSLNQDSL GLLIKTRRKE AALTQEVAAM LCGVTKKTLI RVEKGEDVYI STVFKILDGL
GIRLAVESKS DAGSSEWY
|
|---|
| |