| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0453 |
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| Symbol | |
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| ID | 4921663 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 503415 |
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| End bp | 504410 |
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| Gene Length | 996 bp |
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| Protein Length | 331 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640161982 |
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| Product | response regulator receiver protein |
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| Protein accession | YP_001092584 |
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| Protein GI | 127511387 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG1776] Chemotaxis protein CheC, inhibitor of MCP methylation
[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.986392 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGATTC CCGTACTCAT ATGCGATGAC TCCGCACTCG CTCGCAAGCA GATGGCCAGG
ACCCTGCCCA AGGAGTGGGA TGTCGAGATC ACCTTTGCCA ACAATGGTGC CGAAGGTATC
GAGGCGATCA GGGCCGGCAA GGGCGAAGTG GTCTTTCTCG ATCTCAACAT GCCTGTCATG
GATGGTTACG AGGTACTGGA GACGATTCAG AAGGAAGATC TGCCCGCCCT AGTGATCGTG
GTCTCCGGTG ACATTCAGAT CAAGGCCCAC GAGAAGGTGA AGGCCCTAGG CGCCCTGGAC
TTTATTCAGA AGCCGGTAAG CGCCGATGCC ATCAGTAACA TACTCCAGGA GTACGGCATA
CTCACCATAG CCCTAGGGGA GCAAGACAAC GACAACCCCA TGATAGAGGT GGATCTGCGC
GACGCCTGCC AGGAAGTCGC CAACGTGGCC ATGGGCCGCG CCGCCGATCT GCTGGCCAAG
CTGCTGGATG TCTTCGTGCT GCTGCCAATC CCTAACGTCA ACGTGCTGGA AGTCAGCGAA
CTTACCATGA CCCTCAAGGC CACCGAGCGC TACAGCACGG TATCGGCCCT GTGCCAGGGT
TTTATCGGCG CAGGGGTAGC TGGCGAGGCG CTACTGCTGT TTCACGACTC CTCCTTTCAG
GACATGGCCA AGCTGATGGG GCTGGCAAAT CCCGAGGATG CCAACACAGA GATAGAGGTG
ATGATAGATA CGGGCAACGT GCTTATCGGC GCCTTCCTCA GCGGTATCTC GGAGCAGCTG
CACATGAAGT TCAGCCAGAG CCATCCCGTG GTGCTGGGGC GTCACTGCAC GGTAAACGAC
CTGATTCACG ACAACTCGGA GAAATGGTCC CGCACTCTGG CGATGGAGAT CAACTACCGC
ATCGAAGGCC ATGATATTCA ATGCGATCTC CTCTTGTTGT TTACCGAAGA CTCTTTGCCG
ACGCTTAACT ATAAGCTGGG CTACCTGCTG GATTAA
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| Protein sequence | MSIPVLICDD SALARKQMAR TLPKEWDVEI TFANNGAEGI EAIRAGKGEV VFLDLNMPVM
DGYEVLETIQ KEDLPALVIV VSGDIQIKAH EKVKALGALD FIQKPVSADA ISNILQEYGI
LTIALGEQDN DNPMIEVDLR DACQEVANVA MGRAADLLAK LLDVFVLLPI PNVNVLEVSE
LTMTLKATER YSTVSALCQG FIGAGVAGEA LLLFHDSSFQ DMAKLMGLAN PEDANTEIEV
MIDTGNVLIG AFLSGISEQL HMKFSQSHPV VLGRHCTVND LIHDNSEKWS RTLAMEINYR
IEGHDIQCDL LLLFTEDSLP TLNYKLGYLL D
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