| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0440 |
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| Symbol | |
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| ID | 4920557 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 490170 |
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| End bp | 491024 |
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| Gene Length | 855 bp |
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| Protein Length | 284 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640161969 |
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| Product | methyltransferase type 12 |
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| Protein accession | YP_001092571 |
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| Protein GI | 127511374 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG2227] 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.000034912 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCGTCG CCCCCGCCTA TGGCAAAATA GCCCTCCTAA TTTCAGTCAG CTTTTCCCAT
GGGCGTCACT CAGTGCAAGA CAAAAACTTC GATGCATTAG CCGGTAAATT TGCCAAAAAC
ATCTACGGCA CGCCTAAGGG CGAAGTCCGC GCCGCCGTGC TGTGGCGGGA TATCTCCCAG
GCCATGACAC AACTGCCCGA GGGGCCACTG CGTATTCTGG ACGCCGGCGG CGGCTTCGGC
TTCTTCAGCC AGAAGCTGGC CAAGCTTGGC CATAGCGTCA CTCTGTGCGA TATCTCCAGC
GAAATGTTGG CCCTGGGTCA GGCGCAGATA ACAGAGTATG AAAATAATAG CGGTGAGAAG
CTGGACATCA CACTGCTGCA CGCACCGATA CAATCCCTGA CCCGGGAAGA GCTTGGCCAG
TTCGACCTCA TCCTCTGCCA TGCGGTGGCC GAGTGGCTCA GCGATGCCAA GCAGACCCTG
GCCGGTCTGA CCCAGCTGTT AAAACCCCAG GGGCTGTTTT CCCTCATGTT CTACAACAAG
GAGGCGATGC GCTTTCACAG CCTGATCTCG GGTAACTTCG ACTATGTGGC GGCGGATTTC
AAGGTGAAGA AGAAGGTGGG CCTAACCCCA AGCTATCCCC TCTATATCGA CGATGTGCGA
GGTTGGGTGA GTGATTGGCA GATGGAGCTG GTGACGGCCT CCGGCGTGCG GGTGATCCAC
GACTATCTCA AGACCCACCA GCCCCCTAAT TCAGATTTCA GCCAGCTGCT GGAGATGGAG
CTGCAATACT CGACCCACCC CGCCTACATA GGCCTGGGGC GCTACGTTCA CTTCATCACC
CGTTGGCAAA GATAG
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| Protein sequence | MRVAPAYGKI ALLISVSFSH GRHSVQDKNF DALAGKFAKN IYGTPKGEVR AAVLWRDISQ
AMTQLPEGPL RILDAGGGFG FFSQKLAKLG HSVTLCDISS EMLALGQAQI TEYENNSGEK
LDITLLHAPI QSLTREELGQ FDLILCHAVA EWLSDAKQTL AGLTQLLKPQ GLFSLMFYNK
EAMRFHSLIS GNFDYVAADF KVKKKVGLTP SYPLYIDDVR GWVSDWQMEL VTASGVRVIH
DYLKTHQPPN SDFSQLLEME LQYSTHPAYI GLGRYVHFIT RWQR
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