| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0390 |
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| Symbol | |
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| ID | 4922578 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 440395 |
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| End bp | 441300 |
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| Gene Length | 906 bp |
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| Protein Length | 301 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640161919 |
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| Product | MSHA biogenesis protein MshM |
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| Protein accession | YP_001092521 |
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| Protein GI | 127511324 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3267] Type II secretory pathway, component ExeA (predicted ATPase) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGTATTTGC AGCACTTTCA TTTGGCGCAG CCTCCCTTTT CGCTGACGCC AAATACCGGC
TTCTTCTTCG GCTTGGCGCC CCATGTCGAG GCGCTGCAAG TGCTGCAAAC TGCCCTGCAG
ACGGGGGAAG GTTTTATCAA GGTCACCGGC GAGGTCGGGA CGGGTAAAAC CTTGATCTGT
CGTAAGCTGC TTAACGATAT TCCCGAGCGC TTTCACTGCG CCTATCTGCC CAATCCCTAT
CTGAGTCCCA GCGAGCTGCG TTGGGCACTG GCTTTAGAGC TGGGGCTAAA ATACAGTGCC
GATCTGGATC AGCAGCGCCT TACCAGTCTT ATTCAGCAGC AGCTTATTGC ACTGAGTGCC
CATGGACATT CCATCGTCCT AGTGCTGGAC GAGGCTCAGG CATTGCCGGA CGAGAGCCTG
GAGGCGCTGA GGCTGTTCAC CAACCTGGAG ACAGAGAGTC GCAAGCTGCT GCAGGTAGTC
TTGTTTGGCC AACCTGAGCT GGATACCCGG CTGCAACAGC CGCAGTTTCG TCAGCTCAGA
CAGCGGATCA CCTTCAGCTA TCAACTGCGG CCCATGACCG CCGACGAGAC CAGAGCCTAT
CAGGCCCATA GACTCGAGGT GGCGGGGTAT CGCGGCGAGG GGCTGTTTGG CGCTCGTGAG
AGTAGACGCA TCGCCCGTGC AGCAAGAGGA ATTCCAAGAC TCATCAATAT CTTGTCACAT
AAGGCGCTGT TGCTGGCCTA TGGCGAAGGA GCAGACAAGG TGAGCCTGCG CCACGTGAAG
GGGGCGATTG CCGACACTCA GGATGCCGAT AGGGGGCTGT TTCCCTCTTG GTGGCTGGGC
ACGGTTGGCG CCGTGTCACT GTGCGCCGGC GCGCTATGGT TCTGGCTCAC CCGGGGGCTG
GCATGA
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| Protein sequence | MYLQHFHLAQ PPFSLTPNTG FFFGLAPHVE ALQVLQTALQ TGEGFIKVTG EVGTGKTLIC
RKLLNDIPER FHCAYLPNPY LSPSELRWAL ALELGLKYSA DLDQQRLTSL IQQQLIALSA
HGHSIVLVLD EAQALPDESL EALRLFTNLE TESRKLLQVV LFGQPELDTR LQQPQFRQLR
QRITFSYQLR PMTADETRAY QAHRLEVAGY RGEGLFGARE SRRIARAARG IPRLINILSH
KALLLAYGEG ADKVSLRHVK GAIADTQDAD RGLFPSWWLG TVGAVSLCAG ALWFWLTRGL
A
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