| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0355 |
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| Symbol | |
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| ID | 4920906 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 403215 |
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| End bp | 404573 |
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| Gene Length | 1359 bp |
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| Protein Length | 452 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640161883 |
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| Product | periplasmic copper-binding |
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| Protein accession | YP_001092486 |
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| Protein GI | 127511289 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3420] Nitrous oxidase accessory protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTAGGC CGTCGTTCAG GCAGTCATTT AGCCTTTGGC GACGACAAGG GCAGTGCCTG
GCGCTGGTCT TGAGTCTAGG CCTCTGCTTA GTGCCTCATT TGGCCCTGGG GGCCGATCAG
TCTCAGATCA TAAATATTGC TGATAGCGAG GCGCTGCGCA CGGCGCTGGC ATCTGCACCA
AATGGCACCG AGATACGGCT GTTGCCTGGG CGTTATATAG GGCGTTTCGA GGTCGAACAG
CCGCTGACCC TGCGAGGCGA GCCAGGCGCG GTCATAGATG CCCAAGGCGC AGGTTCGGCG
CTGGTAGTCA GCGCGTCCGG CGTGACCCTT ACCCGGCTGA CGATACGTAA CTGGGGGCGG
GATCTCTACG AGAAAGATGC CGCCATTCGT CTGCTGCCTG GCGCCAACGA GGTGACCATT
GTCGCCAATG AGCTCAGTGG TCCTGGCTTT GGTATCTACG CCAGCGAGGT GAGCGACCTT
AAGCTAAAGG ACAATCAGAT TGAGGGGGAG GCCGAGGCCT TCTTGCTGGA TCGCGGTGAT
GGCATTCATC TGCTGAAGGT GAACTATCCC CATGTCAGCG GCAATCGCAT CAAAACGGTG
CGCGATGGCA TCTACCTGGA GTCTGGCGTC GGTAGCCGTG TCTATGGCAA TCATCTCTCT
GAGCTGCAGT ACGGCCTGCA CTATATGTAT ACCAAGCAGG ATGAGGCCAT GGATAACCTG
GCCTGCCGGG TCAGTGGCGG CTACGCCCTG ATGAACTCAG AGGGAATACG CTTGGTGTTT
AATCGCGTGC GCGAGGCCAA AGAGTTTGGC GTGCTGCTTA ACCTTACCCA TGACGCCGAG
ATCCAGGCTA ATCAGATCGA GGCCACCCAG ATGCCCAATA GTGTCGCCGG GGATCTCTTT
AGCGAGGGCA AGGGGCTGTT TGTCTACGGC GCCAAGCGCA ATCAGATCAG CGGTAACTAT
ATCGCTGGTA ATCAGATCGG CATCGCCATG GCGCTCGGCG GCGAGGACAA TCTTGTCTAT
CAAAACCAGT TTCTGGCCAA TGCCACTCAG GTGCGTTACG TGGGAGAGAC GCGAGTGGAG
TGGAGTCTTC AGGGGCGGGG AAACTATTGG AGCGATTATC GGGGCTGGGA TCTCGATGGC
GATGGTATCG GCGATGGTCA ACATCTGCCC AATGACAGTT TAGATCGCCT GTTTTGGCTG
TACCCGGAGG CGAAGTTCTT GATGGAGAGT CCCCTAGTGA AATTATTGAA GTGGCTGGAT
AACCAGCTGC AAGGCGAACA TTCGGTCGGC GTGGTCGACA GTCATCCCGT GATGACGCCG
CCACCTCATC TTGGCCCCGC CGCCTGGGAG GCATTATGA
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| Protein sequence | MLRPSFRQSF SLWRRQGQCL ALVLSLGLCL VPHLALGADQ SQIINIADSE ALRTALASAP
NGTEIRLLPG RYIGRFEVEQ PLTLRGEPGA VIDAQGAGSA LVVSASGVTL TRLTIRNWGR
DLYEKDAAIR LLPGANEVTI VANELSGPGF GIYASEVSDL KLKDNQIEGE AEAFLLDRGD
GIHLLKVNYP HVSGNRIKTV RDGIYLESGV GSRVYGNHLS ELQYGLHYMY TKQDEAMDNL
ACRVSGGYAL MNSEGIRLVF NRVREAKEFG VLLNLTHDAE IQANQIEATQ MPNSVAGDLF
SEGKGLFVYG AKRNQISGNY IAGNQIGIAM ALGGEDNLVY QNQFLANATQ VRYVGETRVE
WSLQGRGNYW SDYRGWDLDG DGIGDGQHLP NDSLDRLFWL YPEAKFLMES PLVKLLKWLD
NQLQGEHSVG VVDSHPVMTP PPHLGPAAWE AL
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