| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0353 |
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| Symbol | |
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| ID | 4923142 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 401714 |
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| End bp | 402661 |
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| Gene Length | 948 bp |
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| Protein Length | 315 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640161881 |
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| Product | polysulphide reductase, NrfD |
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| Protein accession | YP_001092484 |
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| Protein GI | 127511287 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3301] Formate-dependent nitrite reductase, membrane component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACGGAA CACTCGAATT TACCATGGGC CTCTCGGAAG GGGTCGCCTG GCCTTGGCCC
ATCGCCGTTT ACCTGTTCTT CGCCGGTATC TCGGGCGGTG CGCTGTCGGT CGCCCTGTTT
ATCCGCTTCT ATAAGCAGCA GAGCGCCAAT ACCCCTTTCC TCAAGGCATC GGCGCTGATC
GCCTTCGTCA CCATCGCCCT GGGCATGCTC TGTCTGGTGC TGGATTTGAC CAATCCGCTG
TTCTTCTGGC GCATCTTGGT CTACTACAAC CTCAACTCAG TGATGTCGGT AGGGGTGATC
GCCCTGTCAG CCTATATTCC GCTGGTGGCC CTGATCGCCC TGTTCGCGCT TGAGGAAGAG
ATACGTCGCC TGCCTATGCT GGCGCCGCTG CTACCCTTGA TCGACAAGCT CAGACCCTGG
CGTCGTAGCA GTGAGACTCT GGTGCTGGTG TTGGCGCTGG CGGTATGTGC CTACACGGGC
TTCTTGATCT CGGCGCTCAT CCGCTTCCCA ATCATTAACA CCTCTGTGTT GCCGGCCCTG
TTCGTGGCCT CTGGCCTGTC GGCCGGCGCC GCGGCGGCCA AGATGCTGGC GGTGGGGCTG
TTTAAGGAAG ACAGACACAG CAGCGACATG CAGATTCTGC ACGGCGCCGA GTGGCCCATC
ATGTTTGCCG AAGCCCTGTT CCTCTTCATG ATCATCATGT CGCTGGTGAC AGGTAACGCC
GGTGCTCAGA GCGCCTTCGA GGCCTTCCAC ACTGGCAGCT GGTCCATGGT GTTCTGGCTG
GGTGTCGTGG GTGTGGGTTT TGGCGGCCCT TTGCTGTTGA ACTTCGCCAC CGGCGAGCGC
TTTAGCCATT CCTCTCAGGC CTTCTACCTC TCTGGCCTGT GCGCCGTGAG CGGCATGATG
TGCCTGCGGA TGTTTATCCT CTACGCCGGT CAGAACTTTG CTATCTGA
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| Protein sequence | MDGTLEFTMG LSEGVAWPWP IAVYLFFAGI SGGALSVALF IRFYKQQSAN TPFLKASALI
AFVTIALGML CLVLDLTNPL FFWRILVYYN LNSVMSVGVI ALSAYIPLVA LIALFALEEE
IRRLPMLAPL LPLIDKLRPW RRSSETLVLV LALAVCAYTG FLISALIRFP IINTSVLPAL
FVASGLSAGA AAAKMLAVGL FKEDRHSSDM QILHGAEWPI MFAEALFLFM IIMSLVTGNA
GAQSAFEAFH TGSWSMVFWL GVVGVGFGGP LLLNFATGER FSHSSQAFYL SGLCAVSGMM
CLRMFILYAG QNFAI
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