Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_0349 |
Symbol | |
ID | 4922043 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | + |
Start bp | 398930 |
End bp | 399355 |
Gene Length | 426 bp |
Protein Length | 141 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 640161877 |
Product | rhodanese domain-containing protein |
Protein accession | YP_001092480 |
Protein GI | 127511283 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0607] Rhodanese-related sulfurtransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAATCCA AACTAGGGCT ATCACTGGCA CTGCTGCTGG GACTAACCCC GCTGTGCAGC CTGGCGGGCG GCGGCGCCGA GATGGCACCG GCGCACAGAT ACGAGCATAG CCTGCATACC ATCAGCCTGG CCGAGGCCGA GGCCCTGCTG GCTCAGAAAG ATGTCTACTT CTTCGACGTC AACACATTGG AGCTGTGGGC CGAGGGCTAT ATCCCTGGGG CCGTCTACTT CAATGTCGAT AACTGGAAAA CCCTGCTGCC TGAGGATAAG GCGGCGCGCA TGGTGTTTTA CTGTGCCAAT CGCCTCTGCA ATGCCAGCGA GATAGCGGCT CATCAGGTGA TGAAGCTGGG CTACACCAAT GTGATGCAGA TGCACGATGG CATCTATGGC TGGCGCCTGT CGGGTAGAAG TATTGAAAAA CCATAA
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Protein sequence | MKSKLGLSLA LLLGLTPLCS LAGGGAEMAP AHRYEHSLHT ISLAEAEALL AQKDVYFFDV NTLELWAEGY IPGAVYFNVD NWKTLLPEDK AARMVFYCAN RLCNASEIAA HQVMKLGYTN VMQMHDGIYG WRLSGRSIEK P
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