Gene Shew_0349 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew_0349 
Symbol 
ID4922043 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella loihica PV-4 
KingdomBacteria 
Replicon accessionNC_009092 
Strand
Start bp398930 
End bp399355 
Gene Length426 bp 
Protein Length141 aa 
Translation table11 
GC content57% 
IMG OID640161877 
Productrhodanese domain-containing protein 
Protein accessionYP_001092480 
Protein GI127511283 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0607] Rhodanese-related sulfurtransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATCCA AACTAGGGCT ATCACTGGCA CTGCTGCTGG GACTAACCCC GCTGTGCAGC 
CTGGCGGGCG GCGGCGCCGA GATGGCACCG GCGCACAGAT ACGAGCATAG CCTGCATACC
ATCAGCCTGG CCGAGGCCGA GGCCCTGCTG GCTCAGAAAG ATGTCTACTT CTTCGACGTC
AACACATTGG AGCTGTGGGC CGAGGGCTAT ATCCCTGGGG CCGTCTACTT CAATGTCGAT
AACTGGAAAA CCCTGCTGCC TGAGGATAAG GCGGCGCGCA TGGTGTTTTA CTGTGCCAAT
CGCCTCTGCA ATGCCAGCGA GATAGCGGCT CATCAGGTGA TGAAGCTGGG CTACACCAAT
GTGATGCAGA TGCACGATGG CATCTATGGC TGGCGCCTGT CGGGTAGAAG TATTGAAAAA
CCATAA
 
Protein sequence
MKSKLGLSLA LLLGLTPLCS LAGGGAEMAP AHRYEHSLHT ISLAEAEALL AQKDVYFFDV 
NTLELWAEGY IPGAVYFNVD NWKTLLPEDK AARMVFYCAN RLCNASEIAA HQVMKLGYTN
VMQMHDGIYG WRLSGRSIEK P