| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0300 |
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| Symbol | |
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| ID | 4923910 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 321953 |
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| End bp | 323311 |
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| Gene Length | 1359 bp |
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| Protein Length | 452 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640161824 |
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| Product | sodium:neurotransmitter symporter |
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| Protein accession | YP_001092431 |
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| Protein GI | 127511234 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0733] Na+-dependent transporters of the SNF family |
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| TIGRFAM ID | [TIGR01131] ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes) |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGCAA AAGATTTAGG GCATTTCAGC TCACGCATAG GCTTTATCAT GGCGGCTGCT
GGCTCGGCCG TCGGTGTCGG TAACATCTGG GGATTTCCCA CTCAGGCGGC AACCCATGGT
GGCGGGGCCT TCCTCTTGGT GTATCTGGTG CTCATCTTCC TGCTGGGTTA CCCCATGCTG
GTCGCCGAAC TCATGATTGG CCGCCACGGC CAGACCAACC CTGCCGATGC CATGGCCAAG
CTGGGCAGCA GCAAGCTGAG TCGTAACTTG GGCAAGACCA TAGGTTTCGC CTCCATCATT
ACCGCCACCC TGATCTGCAC CTTCTACAGC ATCCTATCTG GCTGGTTTGT CAGCTTCACC
CTGGCGCCAA TCGCCAGGCT AGTGGGAATG CAAGATATTG CCCTCTGGTT AACCAGCTTC
TCGCTGGAGC GTAATCTACT CTTTACCCTA ATCTTTATTC TCATGGTGGT CTTAGTGATT
CGCCAGGGGG TACAGCAGGG GATCGAGGCT TGGTCCAAGC GACTCATGCC ACTGCTGTTG
GCAATCTTGA TATTGGGCGT CGCCTATATT CTGACTCAGC CCGGTGCGAG CCAGGGGCTA
AACGCCCTAC TGGTGCCGGA TTTCGGACGC ATTTGGGAAC CTCAGGTGCT TATCGGCGCC
TTAGGCCAGA CCTTCTTCTC ACTCACCGTG GGTACAGGCG CCATGATGGT CTACGGCGCC
TACCTGAATC GGCAGGAAAA CCTGGCTAAG CTGACTGCCT ACGTCACCCT GACCGACACC
AGCGTCGCCT TCCTCGCCGC CTTGATGATC ATACCCGCCA TGTATGTGGC CCAACACAAC
GGCGTTCAGA TCTTCGCCGC CGATGGTAGC CTGCTCAATG CCGATACCTT GGTGTTCACC
GTACTGCCGG CGCTGTTCGA CAGCTTGGGC GGCTTAGCTG GGCAGCTGAT CGCCATCGTC
TTCTTCATCC TGATGACCAT AGCCGGGCTG ACATCGGCCA TCTCGATTGT CGAGGTGCCC
ACCAGCTATA TGGTGGAGAA GACAGAGATT CAGCGTCACA GCGCCACCTA TCTGGTGGGC
GGTGGTATCG CCCTGCTGGC GACTATCATG GTGTTTAATT TCGATGCCCT ATTCGCTCTT
GTGATCACCC TGACCACGGA GCGCGCCCAA CCCTTTATCG CCCTGGGCAT CGCCCTATAC
ACTGGCTGGG TATGGCATAG AAACAGCCTG CTCAAGGCGA TCGCCGCCCA GGAAGGCGCC
AAGCTCGACG GCCTCTTCTG GCGCATCTGG CCTGTGTACG TGAAATATGT TTGCCCAGTG
CTGATCCTCG CCATCATATT GCAGCTGCTG ACCGCCTAA
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| Protein sequence | MSAKDLGHFS SRIGFIMAAA GSAVGVGNIW GFPTQAATHG GGAFLLVYLV LIFLLGYPML
VAELMIGRHG QTNPADAMAK LGSSKLSRNL GKTIGFASII TATLICTFYS ILSGWFVSFT
LAPIARLVGM QDIALWLTSF SLERNLLFTL IFILMVVLVI RQGVQQGIEA WSKRLMPLLL
AILILGVAYI LTQPGASQGL NALLVPDFGR IWEPQVLIGA LGQTFFSLTV GTGAMMVYGA
YLNRQENLAK LTAYVTLTDT SVAFLAALMI IPAMYVAQHN GVQIFAADGS LLNADTLVFT
VLPALFDSLG GLAGQLIAIV FFILMTIAGL TSAISIVEVP TSYMVEKTEI QRHSATYLVG
GGIALLATIM VFNFDALFAL VITLTTERAQ PFIALGIALY TGWVWHRNSL LKAIAAQEGA
KLDGLFWRIW PVYVKYVCPV LILAIILQLL TA
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