| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0269 |
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| Symbol | |
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| ID | 4920815 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 285926 |
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| End bp | 286813 |
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| Gene Length | 888 bp |
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| Protein Length | 295 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640161793 |
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| Product | hypothetical protein |
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| Protein accession | YP_001092400 |
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| Protein GI | 127511203 |
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| COG category | [S] Function unknown |
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| COG ID | [COG5429] Uncharacterized secreted protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.00397963 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | TTGAGTAAAG TAGCCCTCTT GTTCATGTTG AGCCTGTTGG CTCATCCCAC TTTTGCGGCT
CAGACGCTGA CGCAGTTTCA TAAGCGCAGT GGTGAGCAGC AACCTCTGGT GGTCGAGCTG
TTTACCTCCC AAGGCTGTAG TAGCTGTCCG CCGATGGAGC GATGGCTCTC GGGATTTAAA
CAAGAGACCG GCCTCTGGCA CTATTATTTC CCGCTGGCAT TTCATGTGAC CTACTGGAAC
TATCTCGGCT GGAAAGATCC CTTCGCTAAA CGCGCCTTCA GTCAGCGCCA GTATGATTAC
CTCAATCACA AGGGGATTTC CCAGGTCTAT ACGCCGCAGC TGGTGATCAA TGGCCGTGAG
TGGCGCCCTG GCGGGCAGGC GCTGCTGCCC GATGAGTCCG ATAAGAGAGC GCAGGTGGGC
AGATTAAGTC TGACCATAGC GGGGCAAGAG TTCACGGCCA GCTTCGACAG CCGATTGCCG
AGCAATCAAG GGCTCACCCT GCATCTTGCC CTGCTGGGCA GCGGGCTTGC GACTCGAGTG
GGTCGGGGAG AGAACAGAGG TAAACACCTG GTGGAAGACT TTGTGGTCTT GAGCCACGGG
CGTTATTCGG CGTTAGCTCG CCAGCCCCTA AATGACCCGG CCTTGCTTGA ACAGGGCTCG
GCTAAACAGG GCTCGGCTAA ACAGGCTTTG GTTGGACAGG CTTTGGCTGG ACAGGCTTTG
ACTGGAAAGA ATTGGGATAA ACAGACTGTC ACCTTTAGCG GGAACATTGA GCCGCTCGTT
AAGGCGGATA ATGCGCCTAA GCGTTTGGCC TGGGTGGCCT GGATCGAACA AGATCATATT
CCCTTGCAGG CCGTGGGTGA TTGGCTGCTG GTCGAGGAAG CGGATTAA
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| Protein sequence | MSKVALLFML SLLAHPTFAA QTLTQFHKRS GEQQPLVVEL FTSQGCSSCP PMERWLSGFK
QETGLWHYYF PLAFHVTYWN YLGWKDPFAK RAFSQRQYDY LNHKGISQVY TPQLVINGRE
WRPGGQALLP DESDKRAQVG RLSLTIAGQE FTASFDSRLP SNQGLTLHLA LLGSGLATRV
GRGENRGKHL VEDFVVLSHG RYSALARQPL NDPALLEQGS AKQGSAKQAL VGQALAGQAL
TGKNWDKQTV TFSGNIEPLV KADNAPKRLA WVAWIEQDHI PLQAVGDWLL VEEAD
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