Gene Shew_0265 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew_0265 
Symbol 
ID4920831 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella loihica PV-4 
KingdomBacteria 
Replicon accessionNC_009092 
Strand+ 
Start bp283924 
End bp284535 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content52% 
IMG OID640161789 
ProductDSBA oxidoreductase 
Protein accessionYP_001092396 
Protein GI127511199 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0786438 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones4 
Fosmid unclonability p-value0.00413273 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAGAAAG CGTTATTGGT AGCACTGGCA CTCTTAGTTG CCCCTATGGC GGCACTGGCC 
GCCGACTACA AAGAGGGAGT TCATTACACA GTGATCAACG ATGGCCCGGC TACGGCTAAG 
CCTGAGATCG CCGAGTTTTT CTCTTTCTAC TGCCCACATT GCTACAACTT TGCCAAGACA 
CAGGTGCCTA AGATCAAGGC TAACCTGCCA GAAGGCGTGG TATTTAAGCA GAACCATGTT 
GAATTTATCG GTCGTGAAAT GGGCCCAGAG ATGTCTCGTG CCTTCGCCGT AGCGAATCAG 
CTGAAGGTTG AAGACAAGAT GGAACACGCG CTGTTTGCCG CTATCCACGA CAAGAAGCAA 
CGTTTCGTTA GCCGTGACGA TATCCGTCAG CTGTTCATCG CCAATGGCGT AGATGGCAAA 
GATTTCGATG CCGCCGCGAA CTCTTTCATG GTGAGCGCAC AGATGGCGCA GATGAAGCGT 
GCCACTGAGA ATGCCAAGCT GTCTGGCGTA CCTGCCCTGG TTGTGAACGG CAAGTACCGT 
GTCGAGACTG GTGCGATTAA GTCTTACGAC GAACTGCTAC AGATCGCTTA CTACCTGACT 
AGCTTGAAGT AA
 
Protein sequence
MKKALLVALA LLVAPMAALA ADYKEGVHYT VINDGPATAK PEIAEFFSFY CPHCYNFAKT 
QVPKIKANLP EGVVFKQNHV EFIGREMGPE MSRAFAVANQ LKVEDKMEHA LFAAIHDKKQ 
RFVSRDDIRQ LFIANGVDGK DFDAAANSFM VSAQMAQMKR ATENAKLSGV PALVVNGKYR 
VETGAIKSYD ELLQIAYYLT SLK