| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0235 |
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| Symbol | |
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| ID | 4921411 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 250449 |
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| End bp | 251399 |
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| Gene Length | 951 bp |
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| Protein Length | 316 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640161759 |
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| Product | isochorismatase hydrolase |
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| Protein accession | YP_001092366 |
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| Protein GI | 127511169 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG1335] Amidases related to nicotinamidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.809907 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTCAAT CTATCCGCCA AGCCGTCATG CAAGCCAGCC AAGCCTGGAT TGCCGATTTC
AACCGTCAGG CCTTTGCCGA CTGCATCGCC CGCTATCTGC CAGAGGCACA GATGCAGGTC
TCTCCCTTCG GCCGTTTCGA TGGCGTTGAA GCCATTAGCC AGTTCTGGCT CGGCTTCGCC
CAGCAGAATC CCGGTGAGCT GGTCTATCGC AATGTAGAGA TCAAGGTGCT CAGCGACAGT
CAGGCAATCC TCTCAGCCAA CTGGCGCATG AACATCGCCA GCGGGTTTAT CAGTAAGGAG
TTGTGGACCC TGGCCGACGA CGGCCACTGG TATCTAGAAG AGGATGATTT TAGCGTGCTG
ACCCAGCTGA GCGAGCCCCT GGCGCCACGG ATGCGCAGCG CCCTGGTGCT GGTAGATCTG
CAAAACGACT ATTTTAAGGG TGGCCGCTTC GCACTGGATA ACTGTGAGGC CGCGGCGGCC
AACGCGGCCA AGCTGCTACA TCATTTTCGC AGCAATCAAC TGCCGGTGAT CCATGTGCAG
CACATCTTCA AGGATCCCGA GGCGAGCTTC TTCCAGGCAG GCACCCAGGG TGTGGAGATC
GCCGACATGG TCGCGCCCAA GGGCAATGAG CCTGTCATCA TCAAGCATTA TGTGGACAGC
TTCATCGACA CAGCTCTGTC TCAGACATTG ATCGAGATGG GCATAGACAA ACTAGTGGTC
GTCGGCGCCA TGGCCCAGGC CTGTGTGCAG ACTCTGTGTC GCAGCGCCGT CAAGGCAGGC
TTCGAGTGTG AGGTGATAAG TGATGCCATT GCCGCCCCGA GCCTCTCCTG GGAGAGTCAG
GATCTGAGCG GCGAGCAGCT GGTGGCGGCG AATCTCATCT CCCTGAGCTT TGGCGGCGCC
AAGGCACTCA GCCTAGATGA CTGGCTGATT CTGGAACGAC TGGCGGGCTA A
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| Protein sequence | MSQSIRQAVM QASQAWIADF NRQAFADCIA RYLPEAQMQV SPFGRFDGVE AISQFWLGFA
QQNPGELVYR NVEIKVLSDS QAILSANWRM NIASGFISKE LWTLADDGHW YLEEDDFSVL
TQLSEPLAPR MRSALVLVDL QNDYFKGGRF ALDNCEAAAA NAAKLLHHFR SNQLPVIHVQ
HIFKDPEASF FQAGTQGVEI ADMVAPKGNE PVIIKHYVDS FIDTALSQTL IEMGIDKLVV
VGAMAQACVQ TLCRSAVKAG FECEVISDAI AAPSLSWESQ DLSGEQLVAA NLISLSFGGA
KALSLDDWLI LERLAG
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