Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_0191 |
Symbol | |
ID | 4922152 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | + |
Start bp | 197116 |
End bp | 197409 |
Gene Length | 294 bp |
Protein Length | 97 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640161710 |
Product | cytochrome c, class I |
Protein accession | YP_001092322 |
Protein GI | 127511125 |
COG category | [C] Energy production and conversion |
COG ID | [COG3245] Cytochrome c5 |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.00000000235852 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
| |
Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.00582407 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGAAAAAAC TGTTAGCATT GTCTGCAGTG GCTGCATTGA CCTTGTCTGC AAACACTTTT GCACAAGAAG GTGAAGCTGT ATATAACAAG GCATGCCATG TATGCCACAG TATGGGTGTC GCCGGTGCCC CTAAAGCTCA TGATGCAGCT GCATGGGAGC CTCGTTTAGC GAAAGGCCTA GACGCACTAC TAGGTAGTGT TAAGACTGGT CTGAACGCTA TGCCACCAGG TGGTATGTGC ACAGATTGTA CCGACGAAGA TTACAAGAAC GCTATCGAGT TCATGTCTAA GTAA
|
Protein sequence | MKKLLALSAV AALTLSANTF AQEGEAVYNK ACHVCHSMGV AGAPKAHDAA AWEPRLAKGL DALLGSVKTG LNAMPPGGMC TDCTDEDYKN AIEFMSK
|
| |