| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0134 |
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| Symbol | |
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| ID | 4920508 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 143555 |
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| End bp | 144673 |
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| Gene Length | 1119 bp |
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| Protein Length | 372 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640161645 |
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| Product | tRNA 2-selenouridine synthase |
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| Protein accession | YP_001092265 |
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| Protein GI | 127511068 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2603] Predicted ATPase |
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| TIGRFAM ID | [TIGR03167] tRNA 2-selenouridine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.404354 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATAATC ATCAATTGGC TAACGTCATT CCGGCAAGCG AATATGGCCG TATCCTGGCC
AGCGGCCATC CCATCATGGA TGTGCGCGCG CCGATAGAGT TCACCAAGGG CGCCTTTCCC
GCCAGCAGCA ACCATCCCCT GATGCGCGAC GATGAGCGAC AACAAGTGGG CACCTGCTAT
AAGGAACATG GCCAGGATGC CGCCATCGCC CTGGGCCACT CCCTGGTGTG TGGCGCGGTC
AAACAGCAGC GCGTAGACGC CTGGCTTGCC TATCTCGATG CCCATCCAGA CGCCTACCTC
TATTGCTTTC GCGGCGGCCT GCGCTCACAG CTAACCCAGC AATGGCTGGC CGAGGCCGGC
AGAGACGTCC CCTACATTCA GGGTGGCTAC AAGGCGATGC GCCAGTACCT TATCGACACC
ATAGACAGGG CGCCAGAGGC GAGGCCTATG CTGATCCTCA GCGGCATCAC AGGCAGTGGC
AAGACAGACT TTCTGCTGCA ACGCCAGGAG GCAGTAGATC TCGAAGGACT GGCCCATCAC
AGGGGATCCA GCTTCGGCCG CTATCACGAG GGACAGCCGA CACAAATCAA CTTCGAAAAC
AGTCTGGGCG TCGCCCTGCT CAAACATCAA CAGAGCCCGG CGAGAATCCT GCTGTTAGAA
GATGAGAGCT ACCTTATCGG ACGCTCGGCG CTGCCCAAGG CCTTCTACAT GGGAATGCAA
GCCGCCAGCG TGGTCATCCT GGAGGAACCG CTGGAGGCAA GGCTGACACG TCTTCTGGAC
GAATATGTCC ATAAGATGCA TCGAGGCTAT GTCGAGCGTC TGGGCGAAGA AGCAGGCTTT
GAGGCATTTG CCGAGTACCT GGCCAACAGC ATCAGTGGCA TCAAGAAACG CCTGGGCGGC
AAGCAGCACG ATGAGCTGCA ACAGATGATC ACAGACGCAT TAGCGGTGCA GACCCAGCGC
GGCGATACCC AGGCGCACCT CGAATGGATC GCCCTGCTGC TGAGCAAGTA TTACGACCCC
ATGTATCAAT ATCAGATTGG CAAGAAGGCC GACAGGGTGA TCTTCCAGGG CGACCATCAG
GCCATGCACC AGTGGCTGGA TGAATACGCC ACTCGCTAG
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| Protein sequence | MDNHQLANVI PASEYGRILA SGHPIMDVRA PIEFTKGAFP ASSNHPLMRD DERQQVGTCY
KEHGQDAAIA LGHSLVCGAV KQQRVDAWLA YLDAHPDAYL YCFRGGLRSQ LTQQWLAEAG
RDVPYIQGGY KAMRQYLIDT IDRAPEARPM LILSGITGSG KTDFLLQRQE AVDLEGLAHH
RGSSFGRYHE GQPTQINFEN SLGVALLKHQ QSPARILLLE DESYLIGRSA LPKAFYMGMQ
AASVVILEEP LEARLTRLLD EYVHKMHRGY VERLGEEAGF EAFAEYLANS ISGIKKRLGG
KQHDELQQMI TDALAVQTQR GDTQAHLEWI ALLLSKYYDP MYQYQIGKKA DRVIFQGDHQ
AMHQWLDEYA TR
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