Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_0105 |
Symbol | |
ID | 4920542 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | - |
Start bp | 113788 |
End bp | 116325 |
Gene Length | 2538 bp |
Protein Length | 845 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640161616 |
Product | peptidase M14, carboxypeptidase A |
Protein accession | YP_001092236 |
Protein GI | 127511039 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGCGAC TCTGCCTTTT GCTGCTTTCT ATCGTCCCCC TGCTCCTAAG CTTTGCGACA AATGCCCAAA GCGTGATCTC AGTCGCGTCC GCTACCCAGA GTGACAGCAG CCTAGCGTCG CCTAGCGAGT TTCTCGGTTA TCCCCTCGGC CAGTGGCATC TGCGCCACGA CCAGATCAAC TACTACCTCA AGCAGTTGGC CCAAAACAGC CCCAGAGTCA GCCTGGAATC CACCGGACAG AGCCACGAGA CCAGGCAGCA GCTCACGGCG GTGATCACCT CCGCCGCCAA TCAGGCCAGG CTGGCAGAGA TAGTCCAGGG ACGTCAACAG GTCAAGGCGG GTAAGGCACC CGAAAGCCCA CTTATCATCT GGCTGGCCTA TTCGATTCAT GGCGACGAGG CCAGCGGCGC CCATGCGGCG CTTGAGGTCA GCTATCGCCT CAGCCAGAAC CAGGAGCCCT GGGTGCAGGA GCTACTGGAC AAGGCCGTGG TACTGATCAC CCCATCGCAA AACCCCGACG GCCTGGATCG CTTCTCCACC TGGACCAACA ACTACACAGG CAAGGTGAAG GTGAGCGATG AGAATCACAA CGAGCACAGA CAGAACTGGC CGGCCGGCAG GCGTAACCAC TATTTTGCCG ACTTGAACCG CGACTGGCTG TTCCTGCGCC ATCCAGAGTC TCAGGGGCGC ATCGCCCTGT TCCATAAGTG GCAGCCGCAC TATCTGGGCG ACTTCCACGA GATGGGCCAT AACCAGACCT TCTTCTTCCA GCCGGGCGTG CCGACACGTA CCCATCCGCT GACTCCCAAA GAGAATCAGG TGATAACCTC AAAGCTCGCC AGTTTCCACG CCAAGGCGCT GGATGAGAGC AAGCAGCGCT ATTTCACCAA GCAGATGTTT GATGACTTCT ACTACGGCAA GGGCTCGACC TATCCAGACA TCAACGGCGC CGTGGGCATA TTGTTCGAAC AGGCCAGCGT GCGCGGCCAG CAGCAGGATT CTGAAAACGG CCTGCTGCGT TTTAGTCAGG CCATAAACAA CCAGATCGCG ACCTCCTTCT CCAGTCTCAA GGGGGCCCTG GCACTGGCAG ATGAGCTGAA GCAGTATCAG AGCCGCTTCT ATCAGCGCAA AGACAAACAC CCACCTTCGG GCCGTGAGGC CGGCTTCCTG CTTGGCGCGC CGGGGGATCC GGGCAGACGT GACGATCTCG CCCAGCTACT GAGCCGTCAT GGAATAGCCT TCTTCTATCT CAAGGACAAG ATGCAACAGG GCAGACACCA ATACAGCCAG GACGACAGCC TGTTTGTCCC CATCAATCAG CCGCAGAAGA CACTGCTGCT GGCGATGTTC GATCTGCGCA CCGAATTTGA AGACGCTACT TTCTACGACG TCTCCAGCTG GAACCTCGCC TTCTCCTATA ACCTGCAGAT GGCCCGTAAC GTTAACCTGA ATGTCGACGA CCTGCTCACC GAGCCGCACG CCAGAGTGCC CGACACCCTG AGCAGCAATA ACGTCGCGGT ATTAATCGAT TGGCGACAGC AGAACGCCGC GCCCATGTTG CAGACCCTGC TTAGCGAGGG TGTTCGGGTC AAGTTTGCTG CCAAACCCTT TAGCCTTAAG GTCGATGGCC AGTCTCTGAA CATGGAGGCC GGCACCCTGC AGATCCCAGT TGCCCAAGCC GCCATGACGC CGAGGGAACT GATCGACAGG CTTACTTCGC TCGCCGAGCA GTATCGGGTG CAGCTACAGG GAGTCGATAG TGGACTCGCC AGCTCAGGGA TAGATCTTGG CAGCCCGGAT TTTCATGACA TAGCCCCCAT CAAGGCCTTG GTTGTCACCG GCTATGGCAC CTCATCGGCC GAGGTGGGTG AGCTCTGGTA TTTCATGGAC AATCTTATCG GCGCGCCCCT GACCCAGGTC GATATCAGCC GCCTACCGAG CATAGAGCTG GCAGCTTACA CCCATCTGTT CTTGATGGAT GGCAGCTATG CCAACCTGGA TGAGAAATAT GCCCGCAAGC TTGGGCAGTT CGCCATTGAA GGCGGAGTGA TCGTCGCGCA GAAAGGCGCG CTGCAGTGGC TCTCCAAGGG CAACCTGCTC AAGAGCGACA TCAGAGAGAA GCGCTACTTC AGCCAGCTGT TTGCCACCGA TGGTCTCTCT TTTGGCGATA AGGCTAAGCT GGATGCCCGC CAGGCGATCG GCGGCGCCGT ATTGGCGCTG GATCTCGACA CCAGCCACCC GATCACCTTC GGCCTAGGCA CTAATCGCCT ACCCGTGCTG AAGAACAAGG TATTTGGTCT GAGTAAGAGC CAGGCCCCCT TCATCACGGC CGCCAGCTAT GCCGACGAGC CCCTGCTGGA TGGTTTCCTA GCCGAGGAGT ATCAGCGCAG CCTGAGTCAG ACCCCAGCCA TTGTCGTGGA GCGCCACGGC AAGGGCGCCC TGGTCGCCTT GGCCGATAAC CTCTTGTTTC GCAATATCTG GCTCGGCTCG CAGAAGGTGT ACGCCAACAG CCTCTACTTC ATTCCGGCCC TACATTGA
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Protein sequence | MLRLCLLLLS IVPLLLSFAT NAQSVISVAS ATQSDSSLAS PSEFLGYPLG QWHLRHDQIN YYLKQLAQNS PRVSLESTGQ SHETRQQLTA VITSAANQAR LAEIVQGRQQ VKAGKAPESP LIIWLAYSIH GDEASGAHAA LEVSYRLSQN QEPWVQELLD KAVVLITPSQ NPDGLDRFST WTNNYTGKVK VSDENHNEHR QNWPAGRRNH YFADLNRDWL FLRHPESQGR IALFHKWQPH YLGDFHEMGH NQTFFFQPGV PTRTHPLTPK ENQVITSKLA SFHAKALDES KQRYFTKQMF DDFYYGKGST YPDINGAVGI LFEQASVRGQ QQDSENGLLR FSQAINNQIA TSFSSLKGAL ALADELKQYQ SRFYQRKDKH PPSGREAGFL LGAPGDPGRR DDLAQLLSRH GIAFFYLKDK MQQGRHQYSQ DDSLFVPINQ PQKTLLLAMF DLRTEFEDAT FYDVSSWNLA FSYNLQMARN VNLNVDDLLT EPHARVPDTL SSNNVAVLID WRQQNAAPML QTLLSEGVRV KFAAKPFSLK VDGQSLNMEA GTLQIPVAQA AMTPRELIDR LTSLAEQYRV QLQGVDSGLA SSGIDLGSPD FHDIAPIKAL VVTGYGTSSA EVGELWYFMD NLIGAPLTQV DISRLPSIEL AAYTHLFLMD GSYANLDEKY ARKLGQFAIE GGVIVAQKGA LQWLSKGNLL KSDIREKRYF SQLFATDGLS FGDKAKLDAR QAIGGAVLAL DLDTSHPITF GLGTNRLPVL KNKVFGLSKS QAPFITAASY ADEPLLDGFL AEEYQRSLSQ TPAIVVERHG KGALVALADN LLFRNIWLGS QKVYANSLYF IPALH
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