Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_3656 |
Symbol | |
ID | 5370161 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | - |
Start bp | 4342966 |
End bp | 4344327 |
Gene Length | 1362 bp |
Protein Length | 453 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 640831914 |
Product | MATE efflux family protein |
Protein accession | YP_001367844 |
Protein GI | 153002163 |
COG category | [V] Defense mechanisms |
COG ID | [COG0534] Na+-driven multidrug efflux pump |
TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGCTAAAG CACCCAAAAC ATTGCAACAA CGCATGAGCA TAGTCGCCCT CACTTGGCCG ATTTTTGTCG AGACCTTGCT GCAATCACTG CTTGGGATCA GCGACATTTT TATGCTCAGC CATTATTCCG ATAACGCGGT AGCGGCGGTG GGACTCACGA CTCAGCTGAT GTTCTTCATG ATGGTTATGT CGATGATGGT GAGCACAGGT GCGAGCATTT TGATTAGCCA GAACAATGGC GCAGGCCAGT CGCAACAGGC GGTCGATATC GGGGTTGCAA GTGTCGCATT GAGCTTAGGA CTCGCCTTGA TCATGGGCGC CTCTATGTTC TTCGGTGCTA AGGGTGTTAT CGGCCTGTTT GCGCTTGAAC ACGATGTGGC AGGCTTTGGA TATGACTACT TAGTGATTTG CGGCAGCTTA AGTATAGGCT TGGTCATGAA CATCGCTTTT GCCGCGATTT TAAGGAGTTA CGGCTTTACC CGCTCGGCCA TGTTAGTCAC CTCAAGCACA GGCTTGATGA ACGTTATCGG TAACTATATT GCCCTGTATT CTCCCTTTGA CTTGCCTGTT TATGGGGTAA CAGGGGTGGC AATTTCCACC GTCACCAGCC AGATCATCGG CGCTGTGATC ATGCTGATGG TGATCCGCTA TAAAAAGATC CCGCTGCCAC TGCAACGGCT TAAATTATTA CCGCGCAGCA CTTATTGGAG CGTGATGCGT ATCGGCTTGC TCAATGCTGG CGAGATGCTG TCTTACAATG TAGCGCAGAT GACCATTATC TATTTTATCA GTCAGATGGG GACGTTATCG CTCACGGCTT ATACCTATGG GCTAAACATC AGCCGGTTTA TTTATTGTTT TGCGGTGGCG CTCGGGCAGG CGACGCAAAT TCAGACCGGA TACTATGTCG GCAAACAATG GTTCGATGAA ATCACTGCGA GAGTGCAACG CTACTGTCTG GTGGGTTTTA TCGCTTCGCT GGCCATAGTC TTAGTCTTCT ACTGGCAGCG ATTCACTATT GTTGGCTGGT TAAGTGAGAA CGAGGAAGTC ATCCAACTGA CGGCGTTATT ACTGGCAGGT TCTATCGCGC TTGAAACGGG GCGGGTATTT AATCTGGTGA TTATTTCGGC ATTAAAAGGT GCGGGTGATG TGGCGTTCCC TGTGCGGGTT GGCCTCTTTA GCATGTGGGG CATAGGGGTA TTATTGGCTT GGTTCTTTGG CCTTCACTTA GGCTATGGCG TACTCGCCGC TTGGCTTGCC GTCGCCGCCG ATGAGTGGAT ACGCGGCCTG ATTATGGTAT ACCGCTGGCG CTCGTGCCGT TGGCAACGTT TTACTCGAAT ACCCGCTGTG ACTGCAGTGT AA
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Protein sequence | MAKAPKTLQQ RMSIVALTWP IFVETLLQSL LGISDIFMLS HYSDNAVAAV GLTTQLMFFM MVMSMMVSTG ASILISQNNG AGQSQQAVDI GVASVALSLG LALIMGASMF FGAKGVIGLF ALEHDVAGFG YDYLVICGSL SIGLVMNIAF AAILRSYGFT RSAMLVTSST GLMNVIGNYI ALYSPFDLPV YGVTGVAIST VTSQIIGAVI MLMVIRYKKI PLPLQRLKLL PRSTYWSVMR IGLLNAGEML SYNVAQMTII YFISQMGTLS LTAYTYGLNI SRFIYCFAVA LGQATQIQTG YYVGKQWFDE ITARVQRYCL VGFIASLAIV LVFYWQRFTI VGWLSENEEV IQLTALLLAG SIALETGRVF NLVIISALKG AGDVAFPVRV GLFSMWGIGV LLAWFFGLHL GYGVLAAWLA VAADEWIRGL IMVYRWRSCR WQRFTRIPAV TAV
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