| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_3655 |
|---|
| Symbol | |
|---|
| ID | 5373829 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS185 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009665 |
|---|
| Strand | + |
|---|
| Start bp | 4342481 |
|---|
| End bp | 4342906 |
|---|
| Gene Length | 426 bp |
|---|
| Protein Length | 141 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 640831913 |
|---|
| Product | CBS domain-containing protein |
|---|
| Protein accession | YP_001367843 |
|---|
| Protein GI | 153002162 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG3448] CBS-domain-containing membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 45 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGTCA GCGATATTAT GAGTGATCAA GTCATCTGCA TCAGCGATGG CGCCAGTTTG
AAAGATGCCC ACCATCTGAT GCAAACCCGT GGCGTACGCC ACTTACCTGT GATTTCTGAA
ATTGATGGCA CCCTCGTTGG CGTACTCACC CATAAAAAGA TGATCGCCAG CGTGATGACT
ATGTTGAACA AGTACGGCCA AGGCGCGCTC GAGCGCAAGG AACGATACAC GCCGATCACA
ACTGTGATGG ACCAAGACTT TCAGCATCTT ACTGCCGACG AGCCTTTAAC TGTGGTGGTG
GAATATTTTA TCGAAAACAA ACTCGGCTGC TTGCCCGTCG TCGATGTCGA TAAAAAGGTG
CTCGGTATCG TCACATCATC GGACTTTATC AAGCTGTGCC GTACCCTGTT GAAGCAGCAA
AGTTAA
|
|---|
| Protein sequence | MKVSDIMSDQ VICISDGASL KDAHHLMQTR GVRHLPVISE IDGTLVGVLT HKKMIASVMT
MLNKYGQGAL ERKERYTPIT TVMDQDFQHL TADEPLTVVV EYFIENKLGC LPVVDVDKKV
LGIVTSSDFI KLCRTLLKQQ S
|
|---|
| |