Gene Shew185_3507 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_3507 
Symbol 
ID5373116 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp4171733 
End bp4172470 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content50% 
IMG OID640831767 
Productdienelactone hydrolase 
Protein accessionYP_001367697 
Protein GI153002016 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0412] Dienelactone hydrolase and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTAGTCA CTCAGGAAAC TCAGGATATC TCCACGCCTT CAGGGCTAAT GCGCACCTAT 
ATCTACCGCC CAGAAGCACA GGGGCAATTT CCAAGCATCA TCTTTTATTC CGAGATATTT
CAGCAAACTG CGCCTATTGC GCGCACTGCG ACAATTCTTG CTGGCCACGG TTTTGTCGTG
TTTGTGCCGG AAGTGTTCCA TGAACTCAAT CCTTTAGGCA CAGTGCTCGC CTACGATGAA
CCGGGTAAAG ACAAAGGCAA CGCCGATAAA TTTGCGAAAC CTTTAGAACA CCACGACAGC
GACACCCAAG CATTAGTCGA CTTTGCCCAT CAACAAGCTT ACTGCAATGG CAAAGTGGGC
AGCATGGGCG TGTGTATCGG CGGCCACTTA GCCTACCGCG CCGCACTCAA CCCCGCTATT
TTAGGTGCAT TTTGCCTCTA TCCGACCGAC ATTCACTCCA ACACCCTGCC CTGCGCCTAC
GGCAATGACT CTCTGAGCCG CAGCGGTGAT ATTCAAGGGG AATTAGTGTT AGTGTTTGGT
AAGCAAGATC CCCATGTATC AGCGGAAGGT CGAGTGTTAA TCCACCAGCA ATTAATGGCG
CTGAACCGTA ATTTCACTTG GCTTGAAGTC AACGCTCAAC ACGCCTTTAT GCGTGATGAA
GGCGATAGAT ACGATCCGGC TTTAGCGCTG CAAATGTACT TACAAGCGAC GGCATTTTTT
CAGCGAGTGT TGCGATAG
 
Protein sequence
MLVTQETQDI STPSGLMRTY IYRPEAQGQF PSIIFYSEIF QQTAPIARTA TILAGHGFVV 
FVPEVFHELN PLGTVLAYDE PGKDKGNADK FAKPLEHHDS DTQALVDFAH QQAYCNGKVG
SMGVCIGGHL AYRAALNPAI LGAFCLYPTD IHSNTLPCAY GNDSLSRSGD IQGELVLVFG
KQDPHVSAEG RVLIHQQLMA LNRNFTWLEV NAQHAFMRDE GDRYDPALAL QMYLQATAFF
QRVLR