| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_3190 |
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| Symbol | |
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| ID | 5369772 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | - |
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| Start bp | 3806068 |
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| End bp | 3807561 |
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| Gene Length | 1494 bp |
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| Protein Length | 497 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640831443 |
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| Product | diguanylate cyclase/phosphodiesterase |
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| Protein accession | YP_001367383 |
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| Protein GI | 153001702 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTCGAAA TCGGGTTAGT TGTTGCTTCT CTCATTTTAT TGATATTTTC ATTATATATA
CTGCAGGCAA AATATAGATC GCAACGGTCA CAGCAAAAAT TCTTAGCACA GCTTTGTCTC
CAGCTAGAGC AACAAAAGAT TGAACGCCAA GCATTAGACC TTGGCACGGT TCCCCAAGAG
TTTGCGCCTA TCTACCATAC CTTAAATGAA TTATTGAAGG CCTTACCCGC AAGCGCAGGT
AAAGACAAGT TGACTGGACT GGTAAACCGG GTCGGCCTTA AACGTACGCT GACCTCCATG
ATGCCGCTGA CTCAAGGGAC ATTAGTGCTG ATTGATATTT ATCGATTTCG CTATGTGAAT
GATCTCTTTG GTTTTGTGTT TGGCGATATC CTGCTAAAGC AATTTGCCGA ACGGTTAAAC
ACCTTAAGTT TATCCCCAAG ATTAATCGCA CGGCTCAATG GTGATGAATT TTGCCTATAT
TACGAGCAAG CGTTGACGGA GGAGCAATTA GTCCATTTGA GAGGCCGTTT GCAGGTGCCT
TTTAGCATTA AGAACACGCC AGTCAGCGTT AAACTTCAAA TCGGCTGTGT GCATTTACAA
GAACACCATG CCGATACTAG CCAGATGTTA CGTCGCGTCG ATTTGGCACT GAAGAAAGCC
CGCCACTCTC GTAGCGCGAT TGCTTACTAT GCTGAGAATG ATGATATTCA ACAGTTAAGA
GAACTGAGAA TTATCGATAG CTTGCCTAAA GGTTTGCAAC GCAATCAAGT GTATATGGTG
TATCAAGCGA AACAGGATAT TGCGACGGGA AGGTGTTTTC AGGTTGAAGC CTTGATACGC
TGGGAACACG ACGAGCTTGG GGTTATTTCT CCAGGTGAGT TTATCCCTTT AGCCGAATAT
GCCGGCATGA TTGATTTAGT GAGCCAATGG GCACTCGATC AGGTTTTAGC GCAGCAGGAA
AAATGGCGCG CCGCAGGGAT ACAATTGTGC GTCGCAGTCA ACCTATCTAC ACGGGATCTC
GACAGTGAAA CCTTGCCCCA AGAAATTGCG GCGAGATTGG CGCATTACAA GCTTCCGCCC
GAATCCTTAA TGATTGAAAT TACGGAAAGT ACCTTAATGG CGGATTTAAC TAAGGCGGTC
GAAACCTTAG ATAAAATTCG TGCTTTAGGG GTGAGGCTCG CAATTGATGA TTTTGGTACC
GGTCATTCTT CACTGGCTTA CTTGAAGCAT CTACCCGTCA ATGAAGTCAA AATCGATAAA
GCTTTTCTAA AGGATCTTGA GCAGGATAAA CCGTCGGAAT ATATCCTCGA AGCCAGTATT
AATATTGCTA AAAAACTCGG TTATGAGGTG ACTGTCGAAG GGATTGAAAC CCCTGAAATT
AGAGAGATAC TCGTCGCTAT GGGCGTCGAT ACCCTACAAG GCATGTATTA CGCTAAGCCC
ATGAGAGCTG CAGAACTGGA AATGAACTGG GCCCGGCTGC ACAATGCCAT GTAA
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| Protein sequence | MFEIGLVVAS LILLIFSLYI LQAKYRSQRS QQKFLAQLCL QLEQQKIERQ ALDLGTVPQE
FAPIYHTLNE LLKALPASAG KDKLTGLVNR VGLKRTLTSM MPLTQGTLVL IDIYRFRYVN
DLFGFVFGDI LLKQFAERLN TLSLSPRLIA RLNGDEFCLY YEQALTEEQL VHLRGRLQVP
FSIKNTPVSV KLQIGCVHLQ EHHADTSQML RRVDLALKKA RHSRSAIAYY AENDDIQQLR
ELRIIDSLPK GLQRNQVYMV YQAKQDIATG RCFQVEALIR WEHDELGVIS PGEFIPLAEY
AGMIDLVSQW ALDQVLAQQE KWRAAGIQLC VAVNLSTRDL DSETLPQEIA ARLAHYKLPP
ESLMIEITES TLMADLTKAV ETLDKIRALG VRLAIDDFGT GHSSLAYLKH LPVNEVKIDK
AFLKDLEQDK PSEYILEASI NIAKKLGYEV TVEGIETPEI REILVAMGVD TLQGMYYAKP
MRAAELEMNW ARLHNAM
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