| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_3090 |
|---|
| Symbol | |
|---|
| ID | 5373483 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS185 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009665 |
|---|
| Strand | + |
|---|
| Start bp | 3680162 |
|---|
| End bp | 3680641 |
|---|
| Gene Length | 480 bp |
|---|
| Protein Length | 159 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 640831336 |
|---|
| Product | HPP family protein? |
|---|
| Protein accession | YP_001367284 |
|---|
| Protein GI | 153001603 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG3448] CBS-domain-containing membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 38 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAAAGAA TCAGTCAGCA GAATCTAAAG ATGGCCTTGC TCGCAGGGGG CGGAGCCATG
TTGTGTATCA GTAGTTTAGC CGCGCTTGAA CAGCTAACAC CGCAAACCAT TTGGTTAATG
GCTCCCTTTG GCGCCACTAT GGTGTTGCTG TTTGCTTTAC CAGAAAGTCC GCTCGCTCAA
CCGAGAAACA TTTTCTGCGG CCACTTACTC ACGAGTCTGG TCGGACTAAT AATTTTAAAT
GCTTTGGGAG TCTCCCCGCT CACCTTAGGT CTCGCGGTCG GATTAGGCAT AGCGGTCATG
ATGCTAACCC ATACAGTGCA TCCACCCGCG GGAGCGAATC CTCTGGTCGT TATGCTCACC
GCGCAGCACT GGGATTTTCT GTATATGCCA GTCGCCAGTG GTGTGGCGCT CATTCTGGCT
TATGGTTGGC TGTATCACAA CTTGCTTTGC CGCCGCCAAT ACCCGCAAAA ATGGTTTTAA
|
|---|
| Protein sequence | MQRISQQNLK MALLAGGGAM LCISSLAALE QLTPQTIWLM APFGATMVLL FALPESPLAQ
PRNIFCGHLL TSLVGLIILN ALGVSPLTLG LAVGLGIAVM MLTHTVHPPA GANPLVVMLT
AQHWDFLYMP VASGVALILA YGWLYHNLLC RRQYPQKWF
|
|---|
| |