Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_3066 |
Symbol | |
ID | 5373162 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | - |
Start bp | 3657170 |
End bp | 3657970 |
Gene Length | 801 bp |
Protein Length | 266 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640831312 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_001367260 |
Protein GI | 153001579 |
COG category | [R] General function prediction only |
COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCGCTG TTAAACCATT GAAAATTAAT ACCGTGCTGA TTACAGGTGC AAGCTCAGGC ATTGGGCTTC AACTGGCGCA GGATTATTTA GCCTTAGGTT GGCACGTCAT TGCCTGTGGC CGCTCGCTGC AAAGGTTAGA GGCGTTAGCC TTGAATGAAC TCGTCGGTGC CACGCTGTTA ATTTTTGATA TATCCCAGCG CGACCAAGTT CAACAAGCTG GCCAAAATGT AGCTGAGCTA TTGGTGAAAA CCGATTCTCA ACTCGATTTG GTCATTTTGA ATGCGGGCAG TTGTGAATAT ATTGATGATG CTAAGGCTTT CGATGATGTG TTGTTCGAGC GCGTTATCCA TACCAATCTA ATTGCAATGG GATATTGCCT CGGGGCATTT TTACCTTTAA TGCCAAGGGG GTCACGTATT GGTTTAATGA GTTCCAGCGC TATTTATTTA CCTTTCCCTC GCGCGCAAGC CTACGGCGCC TCTAAAGCTG GCGTGCAGTA TCTCGCTTCG AGTCTCGCGC TCGACCTTGC CAAGAACGAC ATAGGTGTGA GCTTGATTTG CCCTGGCTTT GTGGCGACGC CACTGACGGC AAAAAATGAT TTTTCTATGC CAATGCAAGT GAGTGTGCAA ACCGCTTCTA AGGCAATCCG CAATGGGCTT AAAGGTGGCA AGCGTGAGAT CCATTTTCCG CGACGCTTTA CTTATCTATT GAAATTGATG TCGTTTTTAC CTGCCTTTGT CTGGCAAAAA ATGATTGCAA ACGATACTCA AGCCAAGCCG CTTAAGGACA AGAGTTTATG A
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Protein sequence | MSAVKPLKIN TVLITGASSG IGLQLAQDYL ALGWHVIACG RSLQRLEALA LNELVGATLL IFDISQRDQV QQAGQNVAEL LVKTDSQLDL VILNAGSCEY IDDAKAFDDV LFERVIHTNL IAMGYCLGAF LPLMPRGSRI GLMSSSAIYL PFPRAQAYGA SKAGVQYLAS SLALDLAKND IGVSLICPGF VATPLTAKND FSMPMQVSVQ TASKAIRNGL KGGKREIHFP RRFTYLLKLM SFLPAFVWQK MIANDTQAKP LKDKSL
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