More than 300 homologs were found in PanDaTox collection
for query gene Shew185_3066 on replicon NC_009665
Organism: Shewanella baltica OS185



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009665  Shew185_3066  short-chain dehydrogenase/reductase SDR  100 
 
 
266 aa  543  1e-153  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_009997  Sbal195_3209  short-chain dehydrogenase/reductase SDR  94.74 
 
 
266 aa  521  1e-147  Shewanella baltica OS195  Bacteria  normal  normal  0.857449 
 
 
-
 
NC_009052  Sbal_3052  short-chain dehydrogenase/reductase SDR  95.11 
 
 
266 aa  523  1e-147  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_1311  short-chain dehydrogenase/reductase SDR  93.61 
 
 
266 aa  514  1.0000000000000001e-145  Shewanella baltica OS223  Bacteria  normal  normal  0.978372 
 
 
-
 
NC_009438  Sputcn32_2712  short-chain dehydrogenase/reductase SDR  79.62 
 
 
275 aa  437  1e-121  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_004347  SO_3382  short chain dehydrogenase/reductase family oxidoreductase  72.52 
 
 
266 aa  402  1e-111  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_008322  Shewmr7_1238  short-chain dehydrogenase/reductase SDR  73.76 
 
 
266 aa  401  1e-111  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_008321  Shewmr4_1167  short-chain dehydrogenase/reductase SDR  73 
 
 
266 aa  399  9.999999999999999e-111  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_008577  Shewana3_1168  short-chain dehydrogenase/reductase SDR  73 
 
 
266 aa  397  9.999999999999999e-111  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_008345  Sfri_3034  short-chain dehydrogenase/reductase SDR  63.95 
 
 
249 aa  283  1.0000000000000001e-75  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.377805  n/a   
 
 
-
 
NC_008709  Ping_1000  short-chain dehydrogenase/reductase SDR  55.7 
 
 
240 aa  253  3e-66  Psychromonas ingrahamii 37  Bacteria  normal  normal 
 
 
-
 
NC_008700  Sama_0813  short chain dehydrogenase/reductase family oxidoreductase  54.17 
 
 
253 aa  243  1.9999999999999999e-63  Shewanella amazonensis SB2B  Bacteria  normal  normal 
 
 
-
 
NC_010506  Swoo_2775  short-chain dehydrogenase/reductase SDR  49.38 
 
 
238 aa  232  5e-60  Shewanella woodyi ATCC 51908  Bacteria  normal  0.88847  normal  0.739494 
 
 
-
 
NC_003910  CPS_1382  short chain dehydrogenase/reductase family oxidoreductase  47.24 
 
 
251 aa  224  1e-57  Colwellia psychrerythraea 34H  Bacteria  normal  0.0851667  n/a   
 
 
-
 
NC_009092  Shew_1481  short-chain dehydrogenase/reductase SDR  50 
 
 
240 aa  220  1.9999999999999999e-56  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_012917  PC1_2097  short-chain dehydrogenase/reductase SDR  49.19 
 
 
238 aa  211  1e-53  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.434652  n/a   
 
 
-
 
NC_009436  Ent638_1490  short-chain dehydrogenase/reductase SDR  47.52 
 
 
239 aa  205  8e-52  Enterobacter sp. 638  Bacteria  normal  normal 
 
 
-
 
NC_007954  Sden_3371  short-chain dehydrogenase/reductase SDR  44.67 
 
 
239 aa  204  2e-51  Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_007963  Csal_0463  short-chain dehydrogenase/reductase SDR  45.12 
 
 
264 aa  194  2e-48  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_013456  VEA_003864  oxidoreductase short-chain dehydrogenase/reductase family  45.42 
 
 
241 aa  192  7e-48  Vibrio sp. Ex25  Bacteria  normal  0.013707  n/a   
 
 
-
 
NC_007969  Pcryo_0727  short-chain dehydrogenase/reductase SDR  42.68 
 
 
245 aa  191  2e-47  Psychrobacter cryohalolentis K5  Bacteria  decreased coverage  0.00978147  normal 
 
 
-
 
NC_009783  VIBHAR_01815  short chain dehydrogenase  45.75 
 
 
241 aa  190  2e-47  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_009457  VC0395_A0637  short chain dehydrogenase  43.57 
 
 
241 aa  188  5.999999999999999e-47  Vibrio cholerae O395  Bacteria  hitchhiker  0.0000000368636  n/a   
 
 
-
 
NC_007005  Psyr_0959  Short-chain dehydrogenase/reductase SDR  43.7 
 
 
262 aa  183  2.0000000000000003e-45  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_012912  Dd1591_1178  short-chain dehydrogenase/reductase SDR  46.58 
 
 
239 aa  184  2.0000000000000003e-45  Dickeya zeae Ech1591  Bacteria  normal  0.300792  n/a   
 
 
-
 
NC_007492  Pfl01_4738  Short-chain dehydrogenase/reductase SDR  43.63 
 
 
260 aa  184  2.0000000000000003e-45  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.9226  normal  0.284155 
 
 
-
 
NC_011138  MADE_01434  Short chain dehydrogenase family protein  37.45 
 
 
239 aa  183  3e-45  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_008228  Patl_1329  short-chain dehydrogenase/reductase SDR  39.74 
 
 
238 aa  180  2e-44  Pseudoalteromonas atlantica T6c  Bacteria  normal  0.371699  n/a   
 
 
-
 
NC_009439  Pmen_1069  short-chain dehydrogenase/reductase SDR  42.32 
 
 
251 aa  177  1e-43  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_004578  PSPTO_1119  oxidoreductase, short chain dehydrogenase/reductase family  43.33 
 
 
262 aa  172  3.9999999999999995e-42  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_010501  PputW619_3172  short-chain dehydrogenase/reductase SDR  46.35 
 
 
250 aa  171  7.999999999999999e-42  Pseudomonas putida W619  Bacteria  normal  0.0471693  normal 
 
 
-
 
NC_002947  PP_2737  short chain dehydrogenase/reductase family oxidoreductase  46.03 
 
 
250 aa  170  2e-41  Pseudomonas putida KT2440  Bacteria  normal  0.420132  normal 
 
 
-
 
NC_009512  Pput_3016  short-chain dehydrogenase/reductase SDR  45.42 
 
 
250 aa  167  2e-40  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_008740  Maqu_1484  short-chain dehydrogenase/reductase SDR  39.22 
 
 
260 aa  164  1.0000000000000001e-39  Marinobacter aquaeolei VT8  Bacteria  normal  0.591298  n/a   
 
 
-
 
NC_009654  Mmwyl1_4073  short-chain dehydrogenase/reductase SDR  39.36 
 
 
252 aa  160  3e-38  Marinomonas sp. MWYL1  Bacteria  normal  0.576341  normal 
 
 
-
 
NC_009524  PsycPRwf_1175  short-chain dehydrogenase/reductase SDR  38.55 
 
 
254 aa  156  3e-37  Psychrobacter sp. PRwf-1  Bacteria  normal  normal 
 
 
-
 
NC_010322  PputGB1_2099  short-chain dehydrogenase/reductase SDR  44.35 
 
 
250 aa  151  1e-35  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_007912  Sde_2469  TonB-dependent receptor  37.6 
 
 
265 aa  136  4e-31  Saccharophagus degradans 2-40  Bacteria  normal  normal 
 
 
-
 
NC_008781  Pnap_1455  short-chain dehydrogenase/reductase SDR  38.17 
 
 
260 aa  132  6.999999999999999e-30  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.271159  normal 
 
 
-
 
NC_009484  Acry_1727  short-chain dehydrogenase/reductase SDR  34.66 
 
 
265 aa  129  4.0000000000000003e-29  Acidiphilium cryptum JF-5  Bacteria  normal  0.218017  n/a   
 
 
-
 
NC_011901  Tgr7_1398  short-chain dehydrogenase/reductase SDR  37.39 
 
 
249 aa  129  4.0000000000000003e-29  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.646056  n/a   
 
 
-
 
NC_010524  Lcho_0468  short-chain dehydrogenase/reductase SDR  36.71 
 
 
257 aa  127  2.0000000000000002e-28  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_011992  Dtpsy_2391  short-chain dehydrogenase/reductase SDR  36.76 
 
 
260 aa  125  7e-28  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_008782  Ajs_2964  short-chain dehydrogenase/reductase SDR  37.15 
 
 
260 aa  125  7e-28  Acidovorax sp. JS42  Bacteria  normal  normal  0.166977 
 
 
-
 
NC_009636  Smed_1362  short-chain dehydrogenase/reductase SDR  38.02 
 
 
282 aa  124  1e-27  Sinorhizobium medicae WSM419  Bacteria  normal  0.390824  normal 
 
 
-
 
NC_007643  Rru_A0729  Short-chain dehydrogenase/reductase SDR  37.35 
 
 
259 aa  123  4e-27  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.503076  n/a   
 
 
-
 
NC_012850  Rleg_1619  short-chain dehydrogenase/reductase SDR  37.39 
 
 
277 aa  122  6e-27  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.44916 
 
 
-
 
NC_011989  Avi_0085  gluconate 5-dehydrogenase  37.73 
 
 
256 aa  120  1.9999999999999998e-26  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_009379  Pnuc_1974  short-chain dehydrogenase/reductase SDR  33.33 
 
 
258 aa  120  1.9999999999999998e-26  Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1  Bacteria  normal  n/a   
 
 
-
 
NC_011662  Tmz1t_1059  short-chain dehydrogenase/reductase SDR  34.89 
 
 
300 aa  119  4.9999999999999996e-26  Thauera sp. MZ1T  Bacteria  normal  0.261261  n/a   
 
 
-
 
NC_011369  Rleg2_1440  short-chain dehydrogenase/reductase SDR  36.86 
 
 
277 aa  119  7e-26  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.313918 
 
 
-
 
NC_007298  Daro_0496  Short-chain dehydrogenase/reductase SDR  36.75 
 
 
251 aa  113  4.0000000000000004e-24  Dechloromonas aromatica RCB  Bacteria  normal  normal  0.661007 
 
 
-
 
NC_008825  Mpe_A0230  hypothetical protein  36.13 
 
 
261 aa  111  1.0000000000000001e-23  Methylibium petroleiphilum PM1  Bacteria  normal  normal  0.599536 
 
 
-
 
NC_013422  Hneap_1889  short-chain dehydrogenase/reductase SDR  32.22 
 
 
256 aa  107  3e-22  Halothiobacillus neapolitanus c2  Bacteria  normal  n/a   
 
 
-
 
NC_007336  Reut_C6102  Short-chain dehydrogenase/reductase SDR  36.82 
 
 
264 aa  105  6e-22  Ralstonia eutropha JMP134  Bacteria  normal  0.0605001  n/a   
 
 
-
 
NC_011206  Lferr_2904  short chain dehydrogenase  31.73 
 
 
261 aa  105  8e-22  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  hitchhiker  0.000166666  decreased coverage  0.000436169 
 
 
-
 
NC_011761  AFE_3307  short chain dehydrogenase  31.73 
 
 
261 aa  105  8e-22  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  0.0864591  n/a   
 
 
-
 
NC_010581  Bind_0286  short-chain dehydrogenase/reductase SDR  34.54 
 
 
267 aa  103  2e-21  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  normal 
 
 
-
 
NC_007575  Suden_1903  Short-chain dehydrogenase/reductase SDR  29.67 
 
 
242 aa  103  3e-21  Sulfurimonas denitrificans DSM 1251  Bacteria  normal  n/a   
 
 
-
 
NC_007614  Nmul_A2453  short chain dehydrogenase  30.89 
 
 
261 aa  101  2e-20  Nitrosospira multiformis ATCC 25196  Bacteria  normal  n/a   
 
 
-
 
NC_010002  Daci_5880  short-chain dehydrogenase/reductase SDR  37.97 
 
 
263 aa  98.2  1e-19  Delftia acidovorans SPH-1  Bacteria  normal  normal  0.195504 
 
 
-
 
NC_010581  Bind_1222  short-chain dehydrogenase/reductase SDR  34.45 
 
 
258 aa  97.8  2e-19  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  0.461582  normal 
 
 
-
 
NC_007947  Mfla_2676  short chain dehydrogenase  30.59 
 
 
264 aa  96.3  5e-19  Methylobacillus flagellatus KT  Bacteria  normal  normal  0.989358 
 
 
-
 
NC_011666  Msil_0375  short-chain dehydrogenase/reductase SDR  30.77 
 
 
254 aa  94.7  1e-18  Methylocella silvestris BL2  Bacteria  n/a    normal  0.187579 
 
 
-
 
NC_011992  Dtpsy_3487  short chain dehydrogenase  31 
 
 
270 aa  94.4  2e-18  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_008782  Ajs_4129  short chain dehydrogenase  30.15 
 
 
270 aa  93.6  3e-18  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_010524  Lcho_0185  short chain dehydrogenase  31.8 
 
 
267 aa  93.2  4e-18  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_010505  Mrad2831_0946  short-chain dehydrogenase/reductase SDR  32.8 
 
 
255 aa  92.8  5e-18  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal  0.841301 
 
 
-
 
NC_007643  Rru_A0427  Short-chain dehydrogenase/reductase SDR  30.42 
 
 
256 aa  92.4  6e-18  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_009952  Dshi_0371  short-chain dehydrogenase/reductase SDR  28.97 
 
 
243 aa  92  8e-18  Dinoroseobacter shibae DFL 12  Bacteria  normal  normal 
 
 
-
 
NC_010814  Glov_1537  short-chain dehydrogenase/reductase SDR  31.08 
 
 
255 aa  91.7  1e-17  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_007298  Daro_3863  short chain dehydrogenase  30.04 
 
 
260 aa  91.3  2e-17  Dechloromonas aromatica RCB  Bacteria  normal  0.331172  normal 
 
 
-
 
NC_007951  Bxe_A1732  putative short-chain dehydrogenase/reductase SDR  32.27 
 
 
257 aa  90.9  2e-17  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_013730  Slin_3645  short-chain dehydrogenase/reductase SDR  33.85 
 
 
268 aa  90.5  3e-17  Spirosoma linguale DSM 74  Bacteria  normal  normal 
 
 
-
 
NC_012791  Vapar_5291  short chain dehydrogenase  30.98 
 
 
260 aa  90.1  3e-17  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_010085  Nmar_0044  short-chain dehydrogenase/reductase SDR  30.71 
 
 
264 aa  89.7  5e-17  Nitrosopumilus maritimus SCM1  Archaea  n/a    normal 
 
 
-
 
NC_011666  Msil_1220  short-chain dehydrogenase/reductase SDR  32.28 
 
 
267 aa  89.4  6e-17  Methylocella silvestris BL2  Bacteria  n/a    normal  0.0396452 
 
 
-
 
NC_007204  Psyc_1201  short chain dehydrogenase  30.43 
 
 
289 aa  87  2e-16  Psychrobacter arcticus 273-4  Bacteria  normal  0.0718298  normal  0.0224844 
 
 
-
 
NC_007493  RSP_1087  short-chain dehydrogenase/reductase family protein  29.22 
 
 
245 aa  87.4  2e-16  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.3765  n/a   
 
 
-
 
NC_008044  TM1040_0408  short-chain dehydrogenase/reductase SDR  29.17 
 
 
240 aa  87.8  2e-16  Ruegeria sp. TM1040  Bacteria  normal  normal 
 
 
-
 
NC_011365  Gdia_3539  short-chain dehydrogenase/reductase SDR  31.84 
 
 
271 aa  87.8  2e-16  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  normal 
 
 
-
 
NC_009049  Rsph17029_2750  short-chain dehydrogenase/reductase SDR  29.22 
 
 
245 aa  87.4  2e-16  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.0379321  normal 
 
 
-
 
NC_013172  Bfae_09810  short-chain alcohol dehydrogenase  31.92 
 
 
261 aa  86.7  4e-16  Brachybacterium faecium DSM 4810  Bacteria  normal  0.0913042  n/a   
 
 
-
 
NC_008009  Acid345_3738  short-chain dehydrogenase/reductase SDR  34.36 
 
 
252 aa  86.3  5e-16  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.87063  normal 
 
 
-
 
NC_010581  Bind_1276  short chain dehydrogenase  31.79 
 
 
245 aa  84.7  0.000000000000001  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  normal  0.127244 
 
 
-
 
NC_007519  Dde_1841  short chain dehydrogenase/reductase family oxidoreductase  31.63 
 
 
250 aa  85.1  0.000000000000001  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  hitchhiker  0.00165114  n/a   
 
 
-
 
NC_007802  Jann_4017  short-chain dehydrogenase/reductase SDR  30.25 
 
 
245 aa  84.7  0.000000000000001  Jannaschia sp. CCS1  Bacteria  normal  0.980517  normal 
 
 
-
 
NC_007973  Rmet_0099  short chain dehydrogenase  29.02 
 
 
265 aa  85.1  0.000000000000001  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_013132  Cpin_4835  short-chain dehydrogenase/reductase SDR  32.64 
 
 
273 aa  84  0.000000000000002  Chitinophaga pinensis DSM 2588  Bacteria  normal  hitchhiker  0.000000227026 
 
 
-
 
NC_011004  Rpal_4152  short-chain dehydrogenase/reductase SDR  34.98 
 
 
257 aa  84  0.000000000000002  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_009428  Rsph17025_2941  short-chain dehydrogenase/reductase SDR  28.81 
 
 
245 aa  84  0.000000000000002  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.19024  normal  0.201158 
 
 
-
 
NC_007404  Tbd_2785  short chain dehydrogenase  28.87 
 
 
254 aa  83.2  0.000000000000004  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.73728  normal  0.939169 
 
 
-
 
NC_009636  Smed_2459  short-chain dehydrogenase/reductase SDR  33.33 
 
 
264 aa  83.2  0.000000000000004  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_010501  PputW619_4451  short chain dehydrogenase/reductase family oxidoreductase  29.81 
 
 
232 aa  83.2  0.000000000000004  Pseudomonas putida W619  Bacteria  normal  0.928751  normal 
 
 
-
 
NC_009943  Dole_2754  short-chain dehydrogenase/reductase SDR  31.66 
 
 
275 aa  83.2  0.000000000000004  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.433019  n/a   
 
 
-
 
NC_008825  Mpe_A3806  short chain dehydrogenase  30.08 
 
 
260 aa  83.2  0.000000000000004  Methylibium petroleiphilum PM1  Bacteria  normal  normal  0.187681 
 
 
-
 
NC_007948  Bpro_4895  short chain dehydrogenase  28.96 
 
 
258 aa  82.8  0.000000000000005  Polaromonas sp. JS666  Bacteria  hitchhiker  0.000739396  normal 
 
 
-
 
NC_010676  Bphyt_4345  short-chain dehydrogenase/reductase SDR  33.33 
 
 
253 aa  82.8  0.000000000000005  Burkholderia phytofirmans PsJN  Bacteria  normal  0.120533  normal 
 
 
-
 
NC_010682  Rpic_1148  short-chain dehydrogenase/reductase SDR  32.05 
 
 
261 aa  82.8  0.000000000000005  Ralstonia pickettii 12J  Bacteria  normal  0.0372396  normal 
 
 
-
 
NC_009485  BBta_4730  putative short-chain dehydrogenases/reductases (SDR) family protein  36.92 
 
 
260 aa  82.8  0.000000000000005  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
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