Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_2604 |
Symbol | |
ID | 5370872 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | + |
Start bp | 3107838 |
End bp | 3109571 |
Gene Length | 1734 bp |
Protein Length | 577 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640830823 |
Product | ATP-dependent protease |
Protein accession | YP_001366802 |
Protein GI | 153001121 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1067] Predicted ATP-dependent protease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.00000149813 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATTCAC TCTTGATACC CACGTCTTCA CTCGCACCTG AATTTAGCCT GCCAACCCTT TCCGAAACGG CTGCCAATCT AAGCGCATTG CTCTTAGGGC AAGAGCGCAC TGTGGACGCG TTTAAACTCC ACCAAGCTAT TGTCGATCAA CACTTGTATC TGGCCGATTT CCCGAGCATT GACCGCCAGT TAATGATCAA AGCCTGTATC GATAGCCTTG CACCTTTGTC CCCTGCGTAT TTAGTGGCGA CACGTCCGAT TGATAAGGCG GTAACATTTC AGTGGCAGTC CGATAAGCCA CTGGAAAATC AAGGAAGTAT TGCCGAGAAA ACAACTCACT ATTGCTACCT GAGTGGTAAT ATTCGCCGCG CTGATTTAGT TGGTCGTATG GTGCAAACTG GGACAACGAG TCAGTATAAA GCTGGCGCCC TAGCCCAATG CCATTATGTA TTCATTTGCG CCGAGTCACT GTGGAAACGT GAAGGTTTAT GGGAATTAGT GATGCAAATC CTTACCCATA AAGAATATCA AATTAGCAGC AGCCTAAGTC CTATTCCACT GAACTGTAAG ATTGTCCTCG TTGGTGCTGG GATGATTTAT AGCCAAGTCA GAACAGAGGA TTGGCAATTT CAACGTCACT TTACACTACT AGCAGAACTC GCCAGCGAAA TCGACTTGGT GCGTTATAAA GAGTCACAAT ACGTCACATG GCTGCAAGCG GTTGCCCAAA GCGTGGATGT CACGCTTGAA CAATCCAGTT TAGCGCCACT CTTTCGTTAT AGTGCACGGT TAACCGAACA TCAACGTCGT CTCAGTTTGT CTATGCTCGA GTTTGCCCAA CTCATGGTGC AAGCAAAAGC CTACCGTGGT AAACCAAGCA TCAATGCAAG CAGTATTGAG CACGCGTTAA CCCAAGCCAA CTATCGGCAT AACAGTTCGG AAGAATATTC AGGCCAAAGC TTCGATGACA ATTTCATAAA TCTGCCAACT TCGGGTGCTA TGGTTGGCCA GATCAATGGC TTAACTGTGA TTGATGCTAT TGATTATAGC TATGGTGAAC CAGCGCGTAT CACGGCATCT GTTCACTACG GTGATGGTGA AGTAGCCGAT ATTGAAAGAA AATCTGAACT TGGCGGGAAT ATACATGCCA AAGGCATGAT GATCCTTTCA GCCTGTTTGT ACCGTATCTT TGGACGAGAT GCGCCATTAC ACCTGAATGC CAATATCGTT TTCGAACAGT CTTATCAAGA AATTGATGGC GATAGTGCAT CACTCGCAGA GTACTGCTGT TTGATGTCAG CGATTGCCGA ACAACCCATT ATTCAATCAC TGGCGATTAC CGGCGCATTG GATCAATTTG GTAATGTGCA AGCGATTGGC GGCATCAACG AGAAGATTGA AGGCTTTTTT AATCTGTGTG AACGTCGCGG ACTTACGGGA GAACAAGGCG TTATTATGCC GAAGTCAAAC GTATTACAGC TTAATCTCAA TCCCAAAGTG ATTACAGCTG TAGGCAAAGG CCTGTTTCAC ATCTATGCCA TAGAGCATAT GGACCAGGCG GTTGAGCTAT TAATGCAAAT GCCAGCGGGT GTTGCCGATG AAGATAATGA TTTCCCACAT GATTCGTTAT ATGGTCTAGT TCAGGAACGA TTAGACAAGC TCGCGGGAAA TGGGGAGGAG GAAATCGGCC TAATCACGAG ATTACTCGCA AAATTGGGAT TTTTTCGCCG CTAA
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Protein sequence | MNSLLIPTSS LAPEFSLPTL SETAANLSAL LLGQERTVDA FKLHQAIVDQ HLYLADFPSI DRQLMIKACI DSLAPLSPAY LVATRPIDKA VTFQWQSDKP LENQGSIAEK TTHYCYLSGN IRRADLVGRM VQTGTTSQYK AGALAQCHYV FICAESLWKR EGLWELVMQI LTHKEYQISS SLSPIPLNCK IVLVGAGMIY SQVRTEDWQF QRHFTLLAEL ASEIDLVRYK ESQYVTWLQA VAQSVDVTLE QSSLAPLFRY SARLTEHQRR LSLSMLEFAQ LMVQAKAYRG KPSINASSIE HALTQANYRH NSSEEYSGQS FDDNFINLPT SGAMVGQING LTVIDAIDYS YGEPARITAS VHYGDGEVAD IERKSELGGN IHAKGMMILS ACLYRIFGRD APLHLNANIV FEQSYQEIDG DSASLAEYCC LMSAIAEQPI IQSLAITGAL DQFGNVQAIG GINEKIEGFF NLCERRGLTG EQGVIMPKSN VLQLNLNPKV ITAVGKGLFH IYAIEHMDQA VELLMQMPAG VADEDNDFPH DSLYGLVQER LDKLAGNGEE EIGLITRLLA KLGFFRR
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