Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_1994 |
Symbol | |
ID | 5369350 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | + |
Start bp | 2374042 |
End bp | 2375358 |
Gene Length | 1317 bp |
Protein Length | 438 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640830198 |
Product | hypothetical protein |
Protein accession | YP_001366200 |
Protein GI | 153000519 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.192222 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTATATCA AATACTTTAG TTATAGCGCG TTGTTCTTGT GTATGAGTGC GACCGTGCAA GCGGAATCGC CAGCCGTTAC CAAAGCAGCC GCAAGTTTAC CAACCTTAAG CCCGGTAATA CCATTGGAAA TCGCTGCAAA ACCGCCTTTC TCTCTTGAGA GTTTGCAACA TGATTTTGAT GATTTTTCTT GGCAATCCTT TATCGCACTG AATTGGCCTG CCAATGCCGA TGGCACACCC AATACCATGT CCACCATTGG GCAAAAAACT AACCAGCCTG TAGTGTGGCT TCATTGGAAG GAAAGCCGGG AGATTTTTTT ACCCGATGGC GTAAAACCAC CTGGGTGGGA TCAGTCCAAT AATGTGCCGG ATGTTTGCAA AAGTATTGAT CCCAAGTCCA TTCCTCAAGG GACTATTTAT TTAACGCAAG TAGGGAAGAC CCCGAATGTG TTGGATGAAA GTGGCGAGCC TTTTACAACG GGTCCATTGA TTGATCAAAA CGGGCTTTAT ACCCGTTATG AAATATTAAC CAATGAAACC ATGTTCAATT TTATTTTGAA CAATAACCTC TACAGTAAAA AAGGCCAGAA ACAGTTTAAT GCCGATGTTG ATTTTACCGC GAGCGACAGT AAAACCGGGC AGGTAGGTTC TATCATGCTT AAGGCCTCAT GGATAAAAAT GGGCGGCAAG TTTGATGCGA CGAATTACTA TACGACTTAT GCGCTAGTTT ATAACAATCC AGAAGAGCAA CACGGGGTCA AGCCCGCGTG TATGCTTGAA CAAGTCGGTT TAGTCGGGTT TCACATTGCC CACAAAACCA CAGGCGAACC ACAATGGATT TGGTCTACCT TTGAGCACGT CGCTAACGCG CCAACCCAAG GAGAGTCAGC ATCATTGTCG GCATATAATT TTTACGATGC TAAATGTACT GACTGCAAAG TCAATGAACC ACCAGCACGC CCGTGGGATC CGGCAAATCC GCACACTAAA CCAACTCAAG TGGAACGCGT CATTCCTATT ACTGCCGACG CTAAAGCCTT AAATGCCAGT TATCACGCTG CACTCGACGC TGTGGTGCCG GGATCGGTAT GGATGAATTA CGAATTGGTC AGTACGCAAT GGCCTACCGA TGCTAAAAAT CCCACCGATC CAACGGGCGT GCCTGCTCCC TCATTTTTAG CGAACACCAC GCTCGAAACT TATATACAGG GTTCGGTAAA GCAAACATCA AGCAGCTGTA TGGCTTGTCA CAATAATGCG GCAACCACTA ACGGTAATTT TGCTGATTTC ACTTACTTGC TGCAACGCGC GCAATAA
|
Protein sequence | MYIKYFSYSA LFLCMSATVQ AESPAVTKAA ASLPTLSPVI PLEIAAKPPF SLESLQHDFD DFSWQSFIAL NWPANADGTP NTMSTIGQKT NQPVVWLHWK ESREIFLPDG VKPPGWDQSN NVPDVCKSID PKSIPQGTIY LTQVGKTPNV LDESGEPFTT GPLIDQNGLY TRYEILTNET MFNFILNNNL YSKKGQKQFN ADVDFTASDS KTGQVGSIML KASWIKMGGK FDATNYYTTY ALVYNNPEEQ HGVKPACMLE QVGLVGFHIA HKTTGEPQWI WSTFEHVANA PTQGESASLS AYNFYDAKCT DCKVNEPPAR PWDPANPHTK PTQVERVIPI TADAKALNAS YHAALDAVVP GSVWMNYELV STQWPTDAKN PTDPTGVPAP SFLANTTLET YIQGSVKQTS SSCMACHNNA ATTNGNFADF TYLLQRAQ
|
| |