Gene Shew185_1484 details

Gene Information

• Locus tag: Shew185_1484
• ID: 5371451
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella baltica OS185
• Kingdom: Bacteria
• Replicon accession: NC_009665
• Strand: +
• Start bp: 1793778
• End bp: 1794467
• Gene Length: 690 bp
• Protein Length: 229 aa
• Translation table: 11
• GC content: 48%
• IMG OID: 640829683
• Product: hypothetical protein
• Protein accession: YP_001365697
• Protein GI: 153000016
• COG category: [S] Function unknown
• COG ID: [COG3575] Uncharacterized protein conserved in bacteria

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 0.0297404
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGTCATG TTCTGAATGG TGCTATGAAT AATGTTATGG ATAAGGCTAT GTGTGAAGCA 
GAGCTAAAGC ATCGATTACT CAAATGGATA ACCCAAGATT GCGAGCGGGT GAGGGCGCTT 
GAACTTGCGC TCCAATGCGC CAAAGTACAC TCAATGCCGC AGTGGTGCCT TGCGGCGGGA 
TTTGTCCGTA ATCTAGTCTG GGATCGCTTG CACGGATTTG AGTTGAGTCC ACTGAACGAT 
ATCGATCTGA TCTATTTTTG CCCGTTAAAT ATTAGCCCCG AGCGGGATCT GGTAATTGAA 
ACCTATCTTA ATCAGCTTGC CCCTGAGTTA CCTTGGTCGG TGAAGAATCA GGCGCGCATG 
CATGTTCGAA ATCAAGACAT GGCTTACACA TCTTGTGTTG ATGCGATGGC CTATTGGCCA 
GAGCTTGAAA CCGCAGTCGG GTTGAGCTAT CAAGTTGTCA ATACAGAATC TGATAATCAG 
ACTAAGACTG GGACTCAGAC TTGTGTTGGG ATGAAAAATC ATCCCGCGTC TTACGATATT 
GAGCTGGTGG CTCCCTTTGG GCTTAACTCC CTGTTTGCAC TCAAACTGAG CGCCAATCCA 
AAGCGAGCAT TATCCGTGTT TCATCACAGA GTCGCGACTA AGGGTTGGCT TACTCGGTAT 
CCTTTGCTTG AATGTTGCCG CACAAGCTGA 

 

Protein sequence

MSHVLNGAMN NVMDKAMCEA ELKHRLLKWI TQDCERVRAL ELALQCAKVH SMPQWCLAAG 
FVRNLVWDRL HGFELSPLND IDLIYFCPLN ISPERDLVIE TYLNQLAPEL PWSVKNQARM 
HVRNQDMAYT SCVDAMAYWP ELETAVGLSY QVVNTESDNQ TKTGTQTCVG MKNHPASYDI 
ELVAPFGLNS LFALKLSANP KRALSVFHHR VATKGWLTRY PLLECCRTS