Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_1471 |
Symbol | |
ID | 5370451 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | + |
Start bp | 1779015 |
End bp | 1779761 |
Gene Length | 747 bp |
Protein Length | 248 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640829670 |
Product | hypothetical protein |
Protein accession | YP_001365684 |
Protein GI | 153000003 |
COG category | [S] Function unknown |
COG ID | [COG1434] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.135208 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGACATCA TGTTTTGGGT TAAGAAAGTT GTTTCACAGG GGATAATGCC GATTCCCTTT ATCCTATTGT TATTAGTAAT TTCTTTTCTG GTATGGCGCC GTCGGAGCAT GGCGAAATAC TTAGTATCAT GCGCCTTCTT TGTTTTACTC TTTTTAAGCA GTCAACTGGG TGTGAATACC TTAGTGCGGC CATTAGAATC GGCTTACCCC ATTAATTCCA CACCCATCAC AGGCGCTTGT TTTGTGATGG TATTAGGTTC GGCGCACTCT GATATTCAAG GCGCGACTGC GGTGCAATCC TTGTCTGCAG TAGCGCTTGC AAGGCTTAGT GAAGGTGTCA GACAACTTAA CTTAGGCCAA GAATACAAGT TAATTGTCAG CGGTTGGGGC GGCGAACTCA CGCAGGTTTC CCATGCTGAA ATGATGGCGA ATGCCGCAGT TGAACTGGGC GTCGATAAAC GTCGGATCAT TCAATTTCCT TTGGCGCGAG ATACGATAGA AGAAGCGCAA TATTTACAGT GGGAATTAGG CGAAGAACCT TTTCGCTTAG TCACATCGGC CACTCATATG CCACGGGCTA TGGCTATCTT CACCGCTAAA GGTTTACATC CTGAAGCCGC ACCAACGGAT TTTATTGGGA GAGATGATTT TTGGTGGCGT TTGACGGCGG ATAATCTAGT GGCTTCTCAG CGGGCGATTC ACGAATACAT TGGCCGTTTG TGGTTATGGT TAAAGACCGT AAGTTAA
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Protein sequence | MDIMFWVKKV VSQGIMPIPF ILLLLVISFL VWRRRSMAKY LVSCAFFVLL FLSSQLGVNT LVRPLESAYP INSTPITGAC FVMVLGSAHS DIQGATAVQS LSAVALARLS EGVRQLNLGQ EYKLIVSGWG GELTQVSHAE MMANAAVELG VDKRRIIQFP LARDTIEEAQ YLQWELGEEP FRLVTSATHM PRAMAIFTAK GLHPEAAPTD FIGRDDFWWR LTADNLVASQ RAIHEYIGRL WLWLKTVS
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