Gene Shew185_1471 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_1471 
Symbol 
ID5370451 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp1779015 
End bp1779761 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content46% 
IMG OID640829670 
Producthypothetical protein 
Protein accessionYP_001365684 
Protein GI153000003 
COG category[S] Function unknown 
COG ID[COG1434] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.135208 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACATCA TGTTTTGGGT TAAGAAAGTT GTTTCACAGG GGATAATGCC GATTCCCTTT 
ATCCTATTGT TATTAGTAAT TTCTTTTCTG GTATGGCGCC GTCGGAGCAT GGCGAAATAC
TTAGTATCAT GCGCCTTCTT TGTTTTACTC TTTTTAAGCA GTCAACTGGG TGTGAATACC
TTAGTGCGGC CATTAGAATC GGCTTACCCC ATTAATTCCA CACCCATCAC AGGCGCTTGT
TTTGTGATGG TATTAGGTTC GGCGCACTCT GATATTCAAG GCGCGACTGC GGTGCAATCC
TTGTCTGCAG TAGCGCTTGC AAGGCTTAGT GAAGGTGTCA GACAACTTAA CTTAGGCCAA
GAATACAAGT TAATTGTCAG CGGTTGGGGC GGCGAACTCA CGCAGGTTTC CCATGCTGAA
ATGATGGCGA ATGCCGCAGT TGAACTGGGC GTCGATAAAC GTCGGATCAT TCAATTTCCT
TTGGCGCGAG ATACGATAGA AGAAGCGCAA TATTTACAGT GGGAATTAGG CGAAGAACCT
TTTCGCTTAG TCACATCGGC CACTCATATG CCACGGGCTA TGGCTATCTT CACCGCTAAA
GGTTTACATC CTGAAGCCGC ACCAACGGAT TTTATTGGGA GAGATGATTT TTGGTGGCGT
TTGACGGCGG ATAATCTAGT GGCTTCTCAG CGGGCGATTC ACGAATACAT TGGCCGTTTG
TGGTTATGGT TAAAGACCGT AAGTTAA
 
Protein sequence
MDIMFWVKKV VSQGIMPIPF ILLLLVISFL VWRRRSMAKY LVSCAFFVLL FLSSQLGVNT 
LVRPLESAYP INSTPITGAC FVMVLGSAHS DIQGATAVQS LSAVALARLS EGVRQLNLGQ
EYKLIVSGWG GELTQVSHAE MMANAAVELG VDKRRIIQFP LARDTIEEAQ YLQWELGEEP
FRLVTSATHM PRAMAIFTAK GLHPEAAPTD FIGRDDFWWR LTADNLVASQ RAIHEYIGRL
WLWLKTVS