Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_0959 |
Symbol | |
ID | 5373046 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | - |
Start bp | 1139330 |
End bp | 1140415 |
Gene Length | 1086 bp |
Protein Length | 361 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640829153 |
Product | sodium/calcium exchanger membrane region |
Protein accession | YP_001365175 |
Protein GI | 152999494 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0387] Ca2+/H+ antiporter |
TIGRFAM ID | [TIGR00378] calcium/proton exchanger (cax) [TIGR00846] calcium/proton exchanger |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAAGACG AGTTCGCCCT GCTACTGGGA ATACTGACCT TAGTATTCTT TAAAACCGGT GGCGATAGCC TACTCGCCGA TGGCACTGCG CTTTCGACCT ATATTCCCGT ATCACTCGCC CTATTGGGCG TTGTCACTTG GGCCATCTTC TCAGTGGTGC GCCACTCTGA TGCACTAGCG ATTAAGCTTG GCGATCCCTA TGGCACTTTA ATCTTAACCC TGTCGGTAAT ATCACTCGAA GTGGTGATAA TCTCTTCTGT GATGCTGACA GGGGAACCTA ACCCTGTGAT GGCGCGCGAC ACTATGTTCG CCGTGGTCAT GTTGATTATC AACGGCTTAG TGGGATTCAC CTTATTACTT GGCGGCTGGC GTTACCACAC CCAGCTTTTT AATTTAGATG GCGTAAAATC CTATTTGGTC GTCATTATCC CCCTCGCCTT ACTCTGTTTA GTACTGCCCA ATTTTACCGA AGGCGGCACT ATCGGTAGCA TGTCTAAAGC CATGTCTTGG ATGCTGATCA TTATTTCGAT TCTGCTCTAT GGCGTATTTT TAGTCGTACA AACCAAGAGC CACAGTCATT TCTTTGTCGA TGCCGACCAT GAAGACCACG AGGAACACCA CGGCATATTA CGCAGTAATG CCTATCATAC CGTGCTATTG ATTGGTTACT TGCTAGTGGT GATCTTATTG GCAAAAACCT TAGCCATGCC AATCAATTAC AGTGTTGCGA CCTTAGGCGC ACCGCAGGCA TTAGGTGGCT TTATCGTGGC CTGTTTGATC TTGTCACCCG AAGCGGTGGG CGGATTTAAG GCGGCGTTAA ACAATCAATT ACAGCGGGCG ATGAATCTGT ATTTCGGCTC AGTACTCGCC ACAATTGCCC TTACCGTTCC AGCAGTTTTA ATTATTGGCG ACGTGATAGG TCAAGAAGTG CATTTAGGCT TGTCAGCCGC CGACATGGTG CTGTTAATCA CCAGTTTAAT GGTCTGCAAG GTCAGCTTCA GCAGCGGTCG CACCAATGCC CTGCACGGCG CAACGCATAT AGTGCTGTTT ATCGTTTACT TGTTCTTAAT GTTTGAACAC GCCTAA
|
Protein sequence | MKDEFALLLG ILTLVFFKTG GDSLLADGTA LSTYIPVSLA LLGVVTWAIF SVVRHSDALA IKLGDPYGTL ILTLSVISLE VVIISSVMLT GEPNPVMARD TMFAVVMLII NGLVGFTLLL GGWRYHTQLF NLDGVKSYLV VIIPLALLCL VLPNFTEGGT IGSMSKAMSW MLIIISILLY GVFLVVQTKS HSHFFVDADH EDHEEHHGIL RSNAYHTVLL IGYLLVVILL AKTLAMPINY SVATLGAPQA LGGFIVACLI LSPEAVGGFK AALNNQLQRA MNLYFGSVLA TIALTVPAVL IIGDVIGQEV HLGLSAADMV LLITSLMVCK VSFSSGRTNA LHGATHIVLF IVYLFLMFEH A
|
| |