Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_0588 |
Symbol | |
ID | 5372008 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | + |
Start bp | 697296 |
End bp | 700202 |
Gene Length | 2907 bp |
Protein Length | 968 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640828787 |
Product | Ig domain-containing protein |
Protein accession | YP_001364813 |
Protein GI | 152999132 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTTAGTA ATAACATACA TTCCCTCGTC GCTGCTTTGG CCTTCTTAAC GATTTCAGGT TGTGGGCAAG AAAAAGAATT AGTCACTGCT TCAGAAGTGC TCGACCCACC TACAATAAAG TTTAGCGCTA TCGACGGCTT GCTTCATGCC GAGCCTGGTA TTCTGAGGGA GGTTGACCTG AGGCAATATG TTGTTGATGG TGAAGGTGTT GAGTTTACTG ACGTGGTGAG CCTAAACCCT CATTGCGCCC ATCCCAAGCT GAGCGATGTT GGGTTTGATG TTTACCCTGA AAAGGGGGGG TTGTGTGACT ACCGTTACAC GGCAGCACTT GGTGGTGAAA GGTTGCAAGC CACCATTAGT ATTTTTGGCA CTCAAGCCCG CACCCCCATA CTGCCTAGCG TTTCCTATTC AATACCGGCT GAGCAGCAGG TCTCCAACAT TAGCTTGCCC ACATTGTTAG GTTTCGATTT CCCTAATGGC TACACTCTGG ATAAAGTCGA GCGTCTAACC TCTAATGGCG GCATGAACGG TGTTGTTATA AGTCATCCAA ACTCAAATGT TATTAATTAC ACCCGCAACG TGAATGAATT CGGATGGGAC AGGCTGAGGT ACACTTTGGT AGGGGGTGGC AATATCAAAG ATGTGCAGGA AGCGTCTGTT GTTGAAGACG TTCTTATGGG GGAAATCTAC ATACTGTCCT CAAGAGCGAC TGACAGTGGG GCGCCAACTA TCGGCAACCC TAACGCCTCA TACCAACCCT CTGTAACCAT TAAAGCTAGA GAGGCTGCAA TTATTGATTT AGCTAAAGCA GGTATGCAGA TTAATGAGTC TAACCCGGAT GATTACCAGC TGATTGAGGT GCAAAGTTTT AGTGCGAGCG TTAGCGCAAC AGCTCCTTCG GATGTGACTA ATAAACGTTT TAATTTTCAA GCGGCAATGC CGGGTGAGCA TGTTGTCAGC TATATAGTGT CAAATCATTA CGGTGAGTAT TCGATGGGCC TCATTCGTAT CGAGGTTAGC GCATCGCAAA GCGGCAAGGT GTTCTCTGAT ATCGCCGTAA GCGACGACAC CCCACCTCAA CTTTCCGGCA GATACACTCT GACTGCGCCA CCGCTCTATA ATAACGACAT TACTAAGGTA TTTAATGTAA AACCGATATG GGATGGGTCC ACTGGTAGCA CTTTGGCGGG GTTTACCAGT CTTGACACTG CTCAAGCCTA TTGCGGTACC TTGGGGGGAA GTGTGCCTGC ATTAACAGAC CGTCTATCTA ATGTTATTAC TGACGCAATT CAGCCAAGTA AGCCGGCTCC CTGGCCGGGC CAAGTCGCTG GTTATGGCCA TATCGATACT GCTCTTTGGG CTGGTGGTCT GTTAGTGGCC TGCGCCAAAT ACTCTTCAAT GAAATGGAAT GCGCTGGCCA CGACGCTCTA TGTTTCAGAC ACTTTTCAAG ATATTGGTGT TCTCACCAAG GATACGGCAG CTCAGAATGT TACTGCTAAT TTAACCGTTG GTGGCAGCAT AAAAACGGCT GATATACAAT TTGAAATGAC CTCCGAGCAA GGTAGTCGTC AGGTGTTTGT CAAAGCTAAA AGCAGTAAGC AAGGCACTTT TGCGGTTCAA TTTTCCGACA GTTCAAATCC GGCGATGTTT ATCAATTCAT CTGAGATGAC TTTTAATATG AGTAAGTGTA ATAGCTATGC TCAAAGCTTG AGCGGTAATT GCATAGGCGT GGAAGTTTTT GATTCAACTA AACCATTTTT CGTAAACTCG GGATACGGGA TTCCATCTAA GCCTCATTTA GTGGTGATGC CACCCTCATC TGCTGCGTTA ACTGCATTGG GGTATGCCCA GAACAACACG TCAAATAATT CGGATAAAAC ATACGCTGCG TTAGCAGTGA AAGGTGCCCA GTTTCGCGCT GACGGACAAG GGGTGGGTGG TCAGGCTGCT CGTTGGTGCA ATAATTTATC ACAAATAGCA TTTATGGGGA GGCGTGATTG GGTGATGCCT TATGTAGAGG AAATCTCCGG AACTAGTGAT AGTAGATATA TTCGTTTCGT TAACTTTCTT AACAACGTGT ACAACTTTAA TAGAGTTGGC ACGTGGTTAA GATTGAATGG TTATACTTTT AACTCAATCT ACATTGGATC GAGATTTGCC GTCAGTACTA CTAATACCCC GCTTCTTGTT TTTTGCATTG CCCCTTTGGA TGTTGAACGT GTAAATCTCA ATGTGAGCGT TGATAACGTG ACATCTAATG GTGCTGAAAA AAACACCGTC GAAGCAACGT TATATCATAG CAATAACCAG CCAGCTACAG GTGTGGACGT AAGCTTTAAG GTTAATAATG GTGCTTTGTT TAGCAATGGT ACGGATTCTA TCATTGTCCG TACAGGCCGT GACGGTAAGG CTAGTGTCGA GGTGGCTAGT ACTACCGAGG GGGTGGTCAC GGTTACTGCG ATCTACAGGG ATTCAACTAA TTTAAACCCT GATTATACGG GTATTACCAA AGTGGTTAAT ATTAACTTTT CTACGTATCT TCCAGATAAC ATTGTGTATG AAGGTATAAG CTTAACCCCC TTGGTGAGTT ATAATCAGGC AGTTGCTGCA GGATTGGAAA TTGATTCTAC ACTTGAGTTA GGGTATACAA TTGCAGTGGT GAATCATATA GATGCAACAA AATATTGTGA ATCAATCAAT GCTAGTTTAC CAACCATAGA GTTCTTGGTG GCGGTGTATA ATGAAAAAGT TTTAAAAAAC GATATCCCTA TAAATTGGCC GCTTTCTCAT ATGTGGTCAG GCAGTGCTGG TAACATCCAA CAATACTACC AGTCTTTTGA TTTCAGTAAT GGGCTGGGTG ACAGCTATCA TATGACAGAG ACTGCAGCAT TCTCCTGTGT ATATTAA
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Protein sequence | MLSNNIHSLV AALAFLTISG CGQEKELVTA SEVLDPPTIK FSAIDGLLHA EPGILREVDL RQYVVDGEGV EFTDVVSLNP HCAHPKLSDV GFDVYPEKGG LCDYRYTAAL GGERLQATIS IFGTQARTPI LPSVSYSIPA EQQVSNISLP TLLGFDFPNG YTLDKVERLT SNGGMNGVVI SHPNSNVINY TRNVNEFGWD RLRYTLVGGG NIKDVQEASV VEDVLMGEIY ILSSRATDSG APTIGNPNAS YQPSVTIKAR EAAIIDLAKA GMQINESNPD DYQLIEVQSF SASVSATAPS DVTNKRFNFQ AAMPGEHVVS YIVSNHYGEY SMGLIRIEVS ASQSGKVFSD IAVSDDTPPQ LSGRYTLTAP PLYNNDITKV FNVKPIWDGS TGSTLAGFTS LDTAQAYCGT LGGSVPALTD RLSNVITDAI QPSKPAPWPG QVAGYGHIDT ALWAGGLLVA CAKYSSMKWN ALATTLYVSD TFQDIGVLTK DTAAQNVTAN LTVGGSIKTA DIQFEMTSEQ GSRQVFVKAK SSKQGTFAVQ FSDSSNPAMF INSSEMTFNM SKCNSYAQSL SGNCIGVEVF DSTKPFFVNS GYGIPSKPHL VVMPPSSAAL TALGYAQNNT SNNSDKTYAA LAVKGAQFRA DGQGVGGQAA RWCNNLSQIA FMGRRDWVMP YVEEISGTSD SRYIRFVNFL NNVYNFNRVG TWLRLNGYTF NSIYIGSRFA VSTTNTPLLV FCIAPLDVER VNLNVSVDNV TSNGAEKNTV EATLYHSNNQ PATGVDVSFK VNNGALFSNG TDSIIVRTGR DGKASVEVAS TTEGVVTVTA IYRDSTNLNP DYTGITKVVN INFSTYLPDN IVYEGISLTP LVSYNQAVAA GLEIDSTLEL GYTIAVVNHI DATKYCESIN ASLPTIEFLV AVYNEKVLKN DIPINWPLSH MWSGSAGNIQ QYYQSFDFSN GLGDSYHMTE TAAFSCVY
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