Gene Shew185_0559 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_0559 
Symbol 
ID5369648 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp645123 
End bp647204 
Gene Length2082 bp 
Protein Length693 aa 
Translation table11 
GC content41% 
IMG OID640828764 
Producthypothetical protein 
Protein accessionYP_001364790 
Protein GI152999109 
COG category[S] Function unknown 
COG ID[COG4688] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGTAAAT CAGATAATAA CGTCATCAAA CTTTGGCAAG CAAAGCACGA CAAAGATACC 
CAAAGAAACT TGGCTGAGTT CATTTTGTTC GCTCAATCCG AGCTAACACT ATACAAAGAA
CAAGGCTGGG ACGCTCCAAG TTGGAAGCCA AATAAAGGGC AGGTTTTAGT TTTCGGGTTC
AGGCAAACGG AAGGGAACAA TTATTCCCCT ATAGATATCT TTAAAGGGCC ATATTTAGAG
TTTGTGAAGG CTTTTATGCG TCAGCAAATG ACCCTTAAGG AGATTACGTC TGCCCATTTG
TGGATATCAA TGTTTCGTAA TCTATATCTA GCATTGGTTG CTCAAGAGGA TGACAAAGTA
CCATGCATTC GAGACGTTAC CGGGCAAACA TTAAAAGATG CTGTTGCGAT AATAAAGCAA
TCTGAAAATA ACCTTACACG CCGTTATCAA ATCGGAGGTA AGTTAACCAG CCTTGTAAAA
TGGCTTCTTG ATGAGCGTAT CGTACTTACG CTACCAACAT TTAAAAATCC ATTTCCCAAG
CAGGTGCATA CATCTGAGCA ATTAGGTGAA GAAGCTGACA GATTTCGTGA AGAGCGATGC
CCCACCATGC ACGAAATGTT ATCTTTGGCT GAATGTTTTG CAAGAGCAGA GGCTGTTCAA
GATAAATATT ATACCAGTGC CCTAGTTTTA CTTTGCTTTG CACCTGGTCG TATCAATGAA
CTTGATGGCT TAACGATACA CTCTTTACAA CAAGGTGATG ATGACGGTTG GTATATCGTA
TGGCATGGGT CAAAAGGTTA TCCTGATCAT CGAAAATCTA TCCCCCCCTT GATGCTAGAT
GTCGTTAAAG AAGCATTTAA TCGACTGATT GAGATCGGAA AACCAGCCCG AGCATGCGCT
AAATGGGCAT ATGAACACCC TAATGAGTTC TACAAACACG AAGGGTGTAT TACGCAACCA
GATCATAAAG CTAGTCAGCC TTTGTCGCAT TTGCAGATTG CTAATGCAAT GAGTATTGTG
GGTTTTTTAA ACAAGAATGG TGTGACCTTT CAACATACCA AAGCATTAAC TAATTGGCTA
AATGCATTAT TAGATGAAAA AACAGTGACT TATTCTCGTT TGAATGAGGT AGTTCATCAA
AAATACAAAA ATAAAAGTTG GCCTAATAAC CCAGACTCAA AGAGACCTGT TTGGGAAAAC
CTGTTGCTGT ATCGGGACCT TGAATTAAAG CCGAAAAGTG CGGCTAAACA GTTTAGTTGG
ACTATGCCAA CGATTAACGC ATTTAATGAG CAACTTAACA AAAAACCTAA ATCCATGAGC
ACCCTTTGGG AGCGTTTTAA CATGACACAG GAGGATGGCA CTCCGATAGC GTTAACGACT
CACCAATTTC GAGTGTGGCT CAATACTCAC GCCAAAATTG GTGGTGTTGA TGATTGGAAA
ATTGCTCAAT GGTCTGGTCG AGCTGATTAC CGCCAGAATT CAGCCTATGA CCTTCGAACA
CTAGAACAAA AAAGTAGACT AAGCACTGAG CTGATGGTGG CTAGTTACGA TGATATGCCT
TCAGCGATTA TCTTGAGAAA GTATAACTTA CCGGTCACAT TGAAATCGGT TGGCATAGAC
AGAGAAGGTA TTGCTGATTT TACAGGTATT GGGTTCTGTA CACATAATTT TGCGCAAACA
CCATGCACAA AAGCGGGCGA GTGCGTGACT TGTAAAGAGC ATGTTTGCTT AACGGGAATC
CCTGAGACCC TGGAAGAGCT AGAACAACTG GATAAACTAA TATCAGAACA ATTAGATAAA
GCAATACAAG CTAATGGTAA AGATGTGTTC GGTGCAGATA GATGGGTTAC GCATCATGGG
TGGAAATTGG GGCATATACG CACCCTAATC GCGATAATGA AGGACGAAAG CCTTCCAGAG
GGAACTGTTA TTCAAATTCC AGTAGAGCAT GATCCCTCAC CAACAAGACG AGCGCTTGAG
GATAAAAAAA TGGTCACAGA CCTAGAGGAT CGTTGCAACA CTAAAGCGCA GATTAAGCCT
CAATTTAATG CAAACATAAA AAAATTGTTG GGGTTTGGAT AA
 
Protein sequence
MGKSDNNVIK LWQAKHDKDT QRNLAEFILF AQSELTLYKE QGWDAPSWKP NKGQVLVFGF 
RQTEGNNYSP IDIFKGPYLE FVKAFMRQQM TLKEITSAHL WISMFRNLYL ALVAQEDDKV
PCIRDVTGQT LKDAVAIIKQ SENNLTRRYQ IGGKLTSLVK WLLDERIVLT LPTFKNPFPK
QVHTSEQLGE EADRFREERC PTMHEMLSLA ECFARAEAVQ DKYYTSALVL LCFAPGRINE
LDGLTIHSLQ QGDDDGWYIV WHGSKGYPDH RKSIPPLMLD VVKEAFNRLI EIGKPARACA
KWAYEHPNEF YKHEGCITQP DHKASQPLSH LQIANAMSIV GFLNKNGVTF QHTKALTNWL
NALLDEKTVT YSRLNEVVHQ KYKNKSWPNN PDSKRPVWEN LLLYRDLELK PKSAAKQFSW
TMPTINAFNE QLNKKPKSMS TLWERFNMTQ EDGTPIALTT HQFRVWLNTH AKIGGVDDWK
IAQWSGRADY RQNSAYDLRT LEQKSRLSTE LMVASYDDMP SAIILRKYNL PVTLKSVGID
REGIADFTGI GFCTHNFAQT PCTKAGECVT CKEHVCLTGI PETLEELEQL DKLISEQLDK
AIQANGKDVF GADRWVTHHG WKLGHIRTLI AIMKDESLPE GTVIQIPVEH DPSPTRRALE
DKKMVTDLED RCNTKAQIKP QFNANIKKLL GFG