Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_0357 |
Symbol | |
ID | 5373152 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | + |
Start bp | 400106 |
End bp | 401524 |
Gene Length | 1419 bp |
Protein Length | 472 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 640828557 |
Product | major facilitator transporter |
Protein accession | YP_001364590 |
Protein GI | 152998909 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2211] Na+/melibiose symporter and related transporters |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 52 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATTCAC CTGTGGCGCA GCCGTTAGTC ACTTGTTCAC GGCGCAGCGA ACGTAACTCT TGGTTAAGAT GTACCCTGCG TCGCTCGCAG CAGGAGGCGG TTGCCTCGTC TATGACGACG GCGACCAGCG ATAACTTCTT CAACGCCTAC GCTATTTTTC TCGGTGCCAG CCTGGCGCAG ATGGGCCTTG TCACAGGTTT ACCTCAGCTT TTTGGCGCTA TCTCCCAGCT TTTATCTGTC TGGCTCGCCA GCCATTTCTC CCGCCGAACT TTTATCGTCT TTTGCGCCGC CTTTCAGGCC TGTGTTGTGC TGGCGATGGG CGCGTTAGCC GCTTTCGGCC CTGAACATGC GGTGTGGATC TTTATCGCTT TAGCCGTTGG TTACCATGGC TTTATCAATC TAATTCAACC CCATTGGCGG GCGTGGATGG GTTCTATTGT TCCCGAACGG CGCCGAGGCA CTTTCTTCGC CGCGCGCACT CGGCTCACTA TGGGCGCATC TTTGAGTGTG TTCTTTATTG GCGGCGGCAT ACTCACCTTA ACCGACTCGA TGCAGATGGC GTGGCTGGGC TTTAGTCTGT TGTTTTCAAT CGCGGCGATG GGGCGGTTTG TCTCGGCTTG GCTACTGCTG CAGATGCACG ATCCCGATCC GCGCGAGCCC AAACAGCGCG GCGTATTTTT GCAGACGATT GGTCATTTTC GCGAGGCGTG GAAGGATAAA ACCTTTCGTC AGTACAGTTT ATTTGTCGCC AGTATGCAGG GCATGGTGGC GATCTCTGCG CCATTTTTTG CCGTTTATAT GTTGGAAGGC TTGAAGTTTA CTTATCTCGA ATTTGTGTTC GCCAGCGTGG CTTCGATAGC GACTCAATTT GTCACCTTGC GATTTTGGGG TCGCTTTAGC GATCAATTCG GCAATCGTTT AGTGATGATC ATCACCAGTT GTATGATCCC AAGCTTGCCG CTGATGTGGC TATTCTCGGA TAACTATCTG TATATCTTAG CTATCCAAGC TTTCTCTGGC TTGGCGTGGA GCGGCTTCAC CTTAAGCACG GCAAATTACC TTTATGATAT CCGCCCCTTT CGCAGTGACT TTGCGACCTA CGCCGCTTTG CAAGCAGCCT TGAGTGCGGC CTGTGTATTT GTTGGCGCGA TATTGGGCGG CACTATTGCC TCCCATGCGG CGGACTTTTT AGTCTGGTCG GGTTGGGATA GCGTGTTATC TAGCCCTATC TTCGTGGTGT TTTTAGTCTC GACCGTGCTG CGAGCCTTAG TGACACTCTG GTTTATTCCG CGCTCGGTCG AACCCAAAGT GCGTCCAAGG CCGCAGTTAC TGCAACTTAT CTTCCGTATC CGCGGCTTTA ATGCCATTTC GGGCGTGAGC CTAGATTGGC TCACTGTGGT GAAACGCCGC AAGCAATAG
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Protein sequence | MDSPVAQPLV TCSRRSERNS WLRCTLRRSQ QEAVASSMTT ATSDNFFNAY AIFLGASLAQ MGLVTGLPQL FGAISQLLSV WLASHFSRRT FIVFCAAFQA CVVLAMGALA AFGPEHAVWI FIALAVGYHG FINLIQPHWR AWMGSIVPER RRGTFFAART RLTMGASLSV FFIGGGILTL TDSMQMAWLG FSLLFSIAAM GRFVSAWLLL QMHDPDPREP KQRGVFLQTI GHFREAWKDK TFRQYSLFVA SMQGMVAISA PFFAVYMLEG LKFTYLEFVF ASVASIATQF VTLRFWGRFS DQFGNRLVMI ITSCMIPSLP LMWLFSDNYL YILAIQAFSG LAWSGFTLST ANYLYDIRPF RSDFATYAAL QAALSAACVF VGAILGGTIA SHAADFLVWS GWDSVLSSPI FVVFLVSTVL RALVTLWFIP RSVEPKVRPR PQLLQLIFRI RGFNAISGVS LDWLTVVKRR KQ
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