| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_27890 |
|---|
| Symbol | |
|---|
| ID | 8396677 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Slackia heliotrinireducens DSM 20476 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013165 |
|---|
| Strand | - |
|---|
| Start bp | 3091035 |
|---|
| End bp | 3091580 |
|---|
| Gene Length | 546 bp |
|---|
| Protein Length | 181 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 644987528 |
|---|
| Product | ribosomal protein L9 |
|---|
| Protein accession | YP_003145131 |
|---|
| Protein GI | 257065459 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0359] Ribosomal protein L9 |
|---|
| TIGRFAM ID | [TIGR00158] ribosomal protein L9 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.00233062 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 37 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGGTTA TCTTGCTTAC TGAACTCCCC GGCAAGGGCG GCGAAGGCGA TATCGTCGAG
GTTGCCCCCG GCTACTTCAA CAACTACCTG GGCCCCCAGC GCATGGCCAT CCTGGCCACC
AAGGGCAACA TCAAGCAGCT CGAGCAGCGC CGCAAGAACA TCGCCAAGCG CGAAGAAGTT
CGTCTGGCCA ACGCTAACGA GCTCAAGGCT GCCCTCGAGG GCAAGGAGAT CTTCGTTCCC
GCTCGCGTGG GCGAAGAAGG CGTCCTGTTC GGTTCCGTTA CCGCCGGCAT GATCGCCGAC
GCTGTCAAGG CCGAGGCCGA CGTCGAGATC GACCGCAAGC GTCTGGTTCT GCGTCAGCCC
CTGAAGACCG CTGGCAAGCA CGAGGTGGAA CTGTCCATCT ATCGTGACGT CAAGGTCAAC
CTGGAGCTGC TGGTCGGCGA CGCCGCTGAG CGTGCCGCCG CCCAGGCCGC CGAGGCTGAG
GCCGATGTCG CCGAGGAAGC CGCTGAGGAA GCTGTCGAAG AGACCGCCGA GGAAGCTGCC
GAATAG
|
|---|
| Protein sequence | MKVILLTELP GKGGEGDIVE VAPGYFNNYL GPQRMAILAT KGNIKQLEQR RKNIAKREEV
RLANANELKA ALEGKEIFVP ARVGEEGVLF GSVTAGMIAD AVKAEADVEI DRKRLVLRQP
LKTAGKHEVE LSIYRDVKVN LELLVGDAAE RAAAQAAEAE ADVAEEAAEE AVEETAEEAA
E
|
|---|
| |