| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_26810 |
|---|
| Symbol | |
|---|
| ID | 8396569 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Slackia heliotrinireducens DSM 20476 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013165 |
|---|
| Strand | + |
|---|
| Start bp | 2961031 |
|---|
| End bp | 2962260 |
|---|
| Gene Length | 1230 bp |
|---|
| Protein Length | 409 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 644987423 |
|---|
| Product | cysteine desulfurase |
|---|
| Protein accession | YP_003145029 |
|---|
| Protein GI | 257065357 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0520] Selenocysteine lyase |
|---|
| TIGRFAM ID | [TIGR01979] cysteine desulfurases, SufS subfamily |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGTCTGCAG TCGATATCCA CACCAACCCT TATAAGCAGG ACTTTCCGCT GCTAGCCAAC
AACCCGCAGC TGGCGTTCAT CGATACGGCC GCCACGGCCC AACGTCCCGC GGCCGTCATC
AACGCGCAGA TGGAGTTTTA CCAGACGCTG AACGCCAACG CTTTGCGAGG CCTCTACAAG
CTGTCTGCGG AAGCCACCTT GGCCATCAAC GGGGCCCGCA AGCACATCTG CGAGTTCATC
AACGCCGACG ACCCCAAGGA CATCGTGTTC TGCCGCAACA CGTCCGAGGC TCTGAACATA
CTGGCCAAAG CGTTCGCGCC CACTATCCTG AAGCCCGGCG ACGAGGTGTG CATCTCCATC
ATGGAGCACC ACAGCAACCT CATCCCCTGG CAGCAGGTGT GCCGCGAGAC CGGCGCCAAG
CTGGTGTACA TGCGCCCCGA CGACCAAGGC TTGATTACCG ACGAGGAAAT TGCCTCGAAG
ATCGGCAAGA ACACCCGCAT CGTCTCGGTC ATGCAAGTGT CCAACGTGCT GGGCGTGGAA
AACCCCGTGA AGAAGATCTG CGCAGCGGCC CATGCGGTCG GCGCCTATAT GATCGTCGAC
GGTGCACAGG CCGTGCCCCA CATGAAGGTG GACGTGGCCG ACCTGGGCTG CGACTTCTAC
GTGTTCTCGG CCCACAAGCT GTTCGGACCC ATGGGCATCG GCGTGCTGTG GGGTAAGAAG
AACCTGCTGG AGGCCATGCC TCCCTTTCTG ACCGGCGGCG AGATGATCGA CGCCGTGACG
GAAACCGACG CCTCCTGGGC ATCCGTGCCT GAGAAGTTCG AAGCCGGCAC CCAGGACGCA
GCGGGCATCT ACGCCACCGA CGCTGCCATC ACCTATGTGG AATCCATCGG GTTCGACGCC
ATTCAAGCCC GCGAGGCCGC TTTGGTCGAG GAGTGCATGA AGCGCCTGGC CGAGCTTCCC
TTCGTGGAGA TCATCGGCCC GGACGACCCG GCGAAGCATC ACGGCGTGGT CAGCTTCAAC
GTCAAGGACA TCCATCCGCA TGATGTGGCC GGCATTCTGG ACACCGAAGA TGTGGCCATC
CGCGCCGGTC ACCACTGCGC ACAGCCGCTT TTGTCGTGGC TTGGCGTGGA TTCTTGTTGC
AGAGCGTCAT TTGCGTTCTA CAATGATGCG CAGGATATCG AAAAGCTCAT CCATGGGCTC
AACACCGTTT GGGGGATGTT CAATGCCTAG
|
|---|
| Protein sequence | MSAVDIHTNP YKQDFPLLAN NPQLAFIDTA ATAQRPAAVI NAQMEFYQTL NANALRGLYK
LSAEATLAIN GARKHICEFI NADDPKDIVF CRNTSEALNI LAKAFAPTIL KPGDEVCISI
MEHHSNLIPW QQVCRETGAK LVYMRPDDQG LITDEEIASK IGKNTRIVSV MQVSNVLGVE
NPVKKICAAA HAVGAYMIVD GAQAVPHMKV DVADLGCDFY VFSAHKLFGP MGIGVLWGKK
NLLEAMPPFL TGGEMIDAVT ETDASWASVP EKFEAGTQDA AGIYATDAAI TYVESIGFDA
IQAREAALVE ECMKRLAELP FVEIIGPDDP AKHHGVVSFN VKDIHPHDVA GILDTEDVAI
RAGHHCAQPL LSWLGVDSCC RASFAFYNDA QDIEKLIHGL NTVWGMFNA
|
|---|
| |