Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shel_26600 |
Symbol | |
ID | 8396548 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Slackia heliotrinireducens DSM 20476 |
Kingdom | Bacteria |
Replicon accession | NC_013165 |
Strand | + |
Start bp | 2934881 |
End bp | 2936023 |
Gene Length | 1143 bp |
Protein Length | 380 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 644987402 |
Product | hypothetical protein |
Protein accession | YP_003145008 |
Protein GI | 257065336 |
COG category | [V] Defense mechanisms |
COG ID | [COG2367] Beta-lactamase class A |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.61546 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.94722 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTCAAGC ACGTCGTCAT AAGCGCCACC GTCCGCCTTT GGAACACGAA GGCCTTGCAG ACGTTTCTCG CATGTGCGCT GGCGATCGCC GTTGTGCTGT GCGCCTCCTG CGACGCCGCT GACGAGCCCA AGCCCGATTC GGCGACGGGA ACCACCGGAC CCGCCACCGA AGCACCCGAA GAGTCCGCCG GCAAGGAAAC GCCCGGCGTC GTCCGCGGAA CCGGAACCGC AAGCATGCCG GAGGTCCAGA AAGCCGCGCG CGAATCCCGG GCGTCGGTGG AGCTGACCTG TGAGCTTCTG GACGACATCG CATCCACGCC CGATTTGCAG GTGTTTTCTT TGTCCGAAGA GCCGGCCCCG GCCCTGGAAA CCAAGACCTA CGACAACCTG ACCAAGGCGA TGCAAGCCAT CCAATCCAAG GGTGACCTGG GCTTTTTCAT GATGGATGTG GAATCGGGCG CAGGCATCGC CTACAACCTG GACGAGCCGT TCTACGGCGC GAGTTCCTTC AAGGGGCCTT ACGCGGTGTT CCTGTGCCAG GAGCTGATCG AGACCGGCAA GGTGAAACTG GACGACGAGT GCAAGATCTG CACCCGGGTG GACAAGCTGG GGTCCTATCC GTTCGGCGGC AGCGACACCG TCCAGAATCT GATTTACGCC GCGGTGGTCG AATCCGACAA CAATGCATAC GTTTCGCTGC GCGACACCTT CGACACCTTG GGATACGACG AATGGGCCAC GGGACTCGGC GTAAAGGATT GCCCCTGGAC GCAAGGTTTT CACTACCCCA CCTACTGCAC TCGCAGCTCA GCGAAGCTGT GGCTGAACAC CTACCGGTAT TTCGAGACGG GCAGCGACAC CTCCGTGTGG CTTGAGGCCG TCATGCAGAT TGCGGAGGAT TCGTTCATCC GCGAGGCCCT CAAGGGCACC GATGCCGTCG TGGCCGACAA GGGCGGTTGG ATTGCCAGCG ACGACGAGCC CGAGTATAAC GTACTTGTGG ATGCAGGCCT CATCGAGTAC GAGGGACGCA CCTATATCAT GTGCGTCATG GCCGGCCTGC CCGACTGCGA AGAGCACCGG GCGTTATGCT CCGATCTGGC CGCAGCCCTG TTCGCAACCC ATGAATCGCT GTCCTGGAAA TAG
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Protein sequence | MVKHVVISAT VRLWNTKALQ TFLACALAIA VVLCASCDAA DEPKPDSATG TTGPATEAPE ESAGKETPGV VRGTGTASMP EVQKAARESR ASVELTCELL DDIASTPDLQ VFSLSEEPAP ALETKTYDNL TKAMQAIQSK GDLGFFMMDV ESGAGIAYNL DEPFYGASSF KGPYAVFLCQ ELIETGKVKL DDECKICTRV DKLGSYPFGG SDTVQNLIYA AVVESDNNAY VSLRDTFDTL GYDEWATGLG VKDCPWTQGF HYPTYCTRSS AKLWLNTYRY FETGSDTSVW LEAVMQIAED SFIREALKGT DAVVADKGGW IASDDEPEYN VLVDAGLIEY EGRTYIMCVM AGLPDCEEHR ALCSDLAAAL FATHESLSWK
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