Gene Shel_26600 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_26600 
Symbol 
ID8396548 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp2934881 
End bp2936023 
Gene Length1143 bp 
Protein Length380 aa 
Translation table11 
GC content62% 
IMG OID644987402 
Producthypothetical protein 
Protein accessionYP_003145008 
Protein GI257065336 
COG category[V] Defense mechanisms 
COG ID[COG2367] Beta-lactamase class A 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.61546 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.94722 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCAAGC ACGTCGTCAT AAGCGCCACC GTCCGCCTTT GGAACACGAA GGCCTTGCAG 
ACGTTTCTCG CATGTGCGCT GGCGATCGCC GTTGTGCTGT GCGCCTCCTG CGACGCCGCT
GACGAGCCCA AGCCCGATTC GGCGACGGGA ACCACCGGAC CCGCCACCGA AGCACCCGAA
GAGTCCGCCG GCAAGGAAAC GCCCGGCGTC GTCCGCGGAA CCGGAACCGC AAGCATGCCG
GAGGTCCAGA AAGCCGCGCG CGAATCCCGG GCGTCGGTGG AGCTGACCTG TGAGCTTCTG
GACGACATCG CATCCACGCC CGATTTGCAG GTGTTTTCTT TGTCCGAAGA GCCGGCCCCG
GCCCTGGAAA CCAAGACCTA CGACAACCTG ACCAAGGCGA TGCAAGCCAT CCAATCCAAG
GGTGACCTGG GCTTTTTCAT GATGGATGTG GAATCGGGCG CAGGCATCGC CTACAACCTG
GACGAGCCGT TCTACGGCGC GAGTTCCTTC AAGGGGCCTT ACGCGGTGTT CCTGTGCCAG
GAGCTGATCG AGACCGGCAA GGTGAAACTG GACGACGAGT GCAAGATCTG CACCCGGGTG
GACAAGCTGG GGTCCTATCC GTTCGGCGGC AGCGACACCG TCCAGAATCT GATTTACGCC
GCGGTGGTCG AATCCGACAA CAATGCATAC GTTTCGCTGC GCGACACCTT CGACACCTTG
GGATACGACG AATGGGCCAC GGGACTCGGC GTAAAGGATT GCCCCTGGAC GCAAGGTTTT
CACTACCCCA CCTACTGCAC TCGCAGCTCA GCGAAGCTGT GGCTGAACAC CTACCGGTAT
TTCGAGACGG GCAGCGACAC CTCCGTGTGG CTTGAGGCCG TCATGCAGAT TGCGGAGGAT
TCGTTCATCC GCGAGGCCCT CAAGGGCACC GATGCCGTCG TGGCCGACAA GGGCGGTTGG
ATTGCCAGCG ACGACGAGCC CGAGTATAAC GTACTTGTGG ATGCAGGCCT CATCGAGTAC
GAGGGACGCA CCTATATCAT GTGCGTCATG GCCGGCCTGC CCGACTGCGA AGAGCACCGG
GCGTTATGCT CCGATCTGGC CGCAGCCCTG TTCGCAACCC ATGAATCGCT GTCCTGGAAA
TAG
 
Protein sequence
MVKHVVISAT VRLWNTKALQ TFLACALAIA VVLCASCDAA DEPKPDSATG TTGPATEAPE 
ESAGKETPGV VRGTGTASMP EVQKAARESR ASVELTCELL DDIASTPDLQ VFSLSEEPAP
ALETKTYDNL TKAMQAIQSK GDLGFFMMDV ESGAGIAYNL DEPFYGASSF KGPYAVFLCQ
ELIETGKVKL DDECKICTRV DKLGSYPFGG SDTVQNLIYA AVVESDNNAY VSLRDTFDTL
GYDEWATGLG VKDCPWTQGF HYPTYCTRSS AKLWLNTYRY FETGSDTSVW LEAVMQIAED
SFIREALKGT DAVVADKGGW IASDDEPEYN VLVDAGLIEY EGRTYIMCVM AGLPDCEEHR
ALCSDLAAAL FATHESLSWK