Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shel_26070 |
Symbol | |
ID | 8396495 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Slackia heliotrinireducens DSM 20476 |
Kingdom | Bacteria |
Replicon accession | NC_013165 |
Strand | - |
Start bp | 2875432 |
End bp | 2876544 |
Gene Length | 1113 bp |
Protein Length | 370 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 644987350 |
Product | putative virion core protein (lumpy skin disease virus) |
Protein accession | YP_003144961 |
Protein GI | 257065289 |
COG category | [S] Function unknown |
COG ID | [COG4260] Putative virion core protein (lumpy skin disease virus) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGGGTAA TTAGGGCATT TACCGGTGCT ATTGGCGGTG CGTTTGCCGA CCAGTGGAAA GACATCATTA CTGCGGGTGC ATTTGACGAG CACGTCGTGG TTTCTCCCGG CATACTAAGG TCCACTAGCA ATGGCCGTGG CACTAACATG TATGGATCAG ACGGCGTCAT AAGCAATGGT TCCAAGATAT ACGTCCCCGA AAATACGGCC TGTTTCATTT TCAGCCAATC GGGAATAGAG GAAATCATCA CGGTACCTGG CGGGTATGAG TACCGGAATG GGCAGGAAAG CGTTTTTAAT GGTTCAAGCT TCACAAGCGC TATCTTTAGT CAGGCTAAGG AAAGACTCGG TTATGGCGGC ATGTCGGCCG ACTACAAGCA AATTGCATTT GTGAACCTCA GGGAAATCAG GGACATAAAG TTCGGCACAA AGGGAGCACA GGTATATAAC GACTACTTTT ACGGTACTGA CCTAGAGATA TTTGCCTACG GTTCTTTCAC TGTGAAGGTC ACCAATCCTG TTACGTTCAT TTGCAACTTC GTTCCCGCTA ACGTCACTTA TTACACCTTC GACGACCAAA AGGTGAGATC ACAGATTCTG GCCGAATTCT TGCAGTCATT TACCGTTGCA CTGAACTCGC TATCTAGCAC TTACAGGATT TCGCAACTGC CCGCGCAGGC CAACGCTATT GCCAATACGG TCGCCAACGA CAACGATAAT GCTGGTACCT GGGAGGAGCG GTTCGGTTTC AAACTGACCA AGGTTGCTAT TGAAAACATC GAGTTTACCG AGCAATCGAG AGAGCTTGTC AGACAATACT CGGAGAACAG AATGCGCGTG AAGGCGTACG ACGATGTTTC TCAGCGTGCG TCCAACATAG CCGCACAGCA ACAGATTGCT GAGGGAATCC GAGATAACGG TCTTGGCGAT GCGGGTGGCA TGATCTTTGG CATGAACATG GCTCAAGGTC TGGGATCCGT CGCTGAGCAG AGGCCCGCCA TGTCATTCGA TGAACAGATT GAACAGCTTA AGAAGTTGAA AGAGCTTGTC GACGCTGGCA TTCTTACGCA AGAAGAGTTC GACGTCAAAA AGAGGGAGAT CATGGGTCTC TAG
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Protein sequence | MGVIRAFTGA IGGAFADQWK DIITAGAFDE HVVVSPGILR STSNGRGTNM YGSDGVISNG SKIYVPENTA CFIFSQSGIE EIITVPGGYE YRNGQESVFN GSSFTSAIFS QAKERLGYGG MSADYKQIAF VNLREIRDIK FGTKGAQVYN DYFYGTDLEI FAYGSFTVKV TNPVTFICNF VPANVTYYTF DDQKVRSQIL AEFLQSFTVA LNSLSSTYRI SQLPAQANAI ANTVANDNDN AGTWEERFGF KLTKVAIENI EFTEQSRELV RQYSENRMRV KAYDDVSQRA SNIAAQQQIA EGIRDNGLGD AGGMIFGMNM AQGLGSVAEQ RPAMSFDEQI EQLKKLKELV DAGILTQEEF DVKKREIMGL
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