Gene Shel_25940 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_25940 
Symbol 
ID8396482 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp2864722 
End bp2865366 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content65% 
IMG OID644987337 
Producthypothetical protein 
Protein accessionYP_003144948 
Protein GI257065276 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1506] Dipeptidyl aminopeptidases/acylaminoacyl-peptidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.375139 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACCGGC CCTTCGTGGA GCGCGGGTTC GCGTTCGTTG CCTTCGACTT CTGCGGCGGA 
GGACCCGAGT CGCAAAGCAG CGGAACCATG CTGGACATGT CGGTGCTCAC CGAGGCGGAC
GACCTTGACG CCGTCGTCGA CTGGGCGCGC GCCCGGCAGG ATATCGACGC AAACAACCTG
TTCCTGTTGG GGAGCAGCCA GGGAGGCTAC GCCAGCACAG TCGTCGCAAG CAGGCGGCCC
GAAGACGTGG CGGCGCTGGG CCTGTTCTTC CCCGCATTCT GCATCGGCGA CGACGCACAC
GAGCGCATTG CGGCATGCGG TGGCGTTGTT CCTGAAACGA TGCAGGTGGG GCCCCATGTC
ATCGGGCGGC GGTACAACGA GGACGCGCTG GCCACCGACG TTTTCGAGCT CATGGGCCGC
TACCCGGGCG ACGTCTTCAT CGTCCACGGC GAGCTGGACC GGATGGTGCC GTCCTCGTAT
TCGCGGCGGG CTGCCGAAAC GTTCCCGGGT GCTTGCAGGC TCGAAATCGT CGAAGGCGTG
GGGCATGGCT TCCGCACCTG GCCCTTCGAG CTTTTCGACC GCGCCCTCAA CGACGCGATC
GACTTCTTCG AAGACCACCG GCTCCTAAAA GCCTCTGAAA AGTAA
 
Protein sequence
MHRPFVERGF AFVAFDFCGG GPESQSSGTM LDMSVLTEAD DLDAVVDWAR ARQDIDANNL 
FLLGSSQGGY ASTVVASRRP EDVAALGLFF PAFCIGDDAH ERIAACGGVV PETMQVGPHV
IGRRYNEDAL ATDVFELMGR YPGDVFIVHG ELDRMVPSSY SRRAAETFPG ACRLEIVEGV
GHGFRTWPFE LFDRALNDAI DFFEDHRLLK ASEK