Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shel_25940 |
Symbol | |
ID | 8396482 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Slackia heliotrinireducens DSM 20476 |
Kingdom | Bacteria |
Replicon accession | NC_013165 |
Strand | - |
Start bp | 2864722 |
End bp | 2865366 |
Gene Length | 645 bp |
Protein Length | 214 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 644987337 |
Product | hypothetical protein |
Protein accession | YP_003144948 |
Protein GI | 257065276 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1506] Dipeptidyl aminopeptidases/acylaminoacyl-peptidases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.375139 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCACCGGC CCTTCGTGGA GCGCGGGTTC GCGTTCGTTG CCTTCGACTT CTGCGGCGGA GGACCCGAGT CGCAAAGCAG CGGAACCATG CTGGACATGT CGGTGCTCAC CGAGGCGGAC GACCTTGACG CCGTCGTCGA CTGGGCGCGC GCCCGGCAGG ATATCGACGC AAACAACCTG TTCCTGTTGG GGAGCAGCCA GGGAGGCTAC GCCAGCACAG TCGTCGCAAG CAGGCGGCCC GAAGACGTGG CGGCGCTGGG CCTGTTCTTC CCCGCATTCT GCATCGGCGA CGACGCACAC GAGCGCATTG CGGCATGCGG TGGCGTTGTT CCTGAAACGA TGCAGGTGGG GCCCCATGTC ATCGGGCGGC GGTACAACGA GGACGCGCTG GCCACCGACG TTTTCGAGCT CATGGGCCGC TACCCGGGCG ACGTCTTCAT CGTCCACGGC GAGCTGGACC GGATGGTGCC GTCCTCGTAT TCGCGGCGGG CTGCCGAAAC GTTCCCGGGT GCTTGCAGGC TCGAAATCGT CGAAGGCGTG GGGCATGGCT TCCGCACCTG GCCCTTCGAG CTTTTCGACC GCGCCCTCAA CGACGCGATC GACTTCTTCG AAGACCACCG GCTCCTAAAA GCCTCTGAAA AGTAA
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Protein sequence | MHRPFVERGF AFVAFDFCGG GPESQSSGTM LDMSVLTEAD DLDAVVDWAR ARQDIDANNL FLLGSSQGGY ASTVVASRRP EDVAALGLFF PAFCIGDDAH ERIAACGGVV PETMQVGPHV IGRRYNEDAL ATDVFELMGR YPGDVFIVHG ELDRMVPSSY SRRAAETFPG ACRLEIVEGV GHGFRTWPFE LFDRALNDAI DFFEDHRLLK ASEK
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